Class b: All beta proteins [48724] (176 folds) |
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies) sandwich; 7 strands in 2 sheets; greek-key some members of the fold have additional strands |
Superfamily b.1.1: Immunoglobulin [48726] (5 families) |
Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins) |
Protein Immunoglobulin heavy chain variable domain, VH [88543] (21 species) VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species |
Species Human (Homo sapiens), cluster 1 [TaxId:9606] [88544] (37 PDB entries) |
Domain d1n0xk1: 1n0x K:1-113 [91530] Other proteins in same PDB: d1n0xh2, d1n0xk2, d1n0xl1, d1n0xl2, d1n0xm1, d1n0xm2 part of an anti HIV-1 Fab complexed with cxs, gol, k, so4 |
PDB Entry: 1n0x (more details), 1.8 Å
SCOPe Domain Sequences for d1n0xk1:
Sequence; same for both SEQRES and ATOM records: (download)
>d1n0xk1 b.1.1.1 (K:1-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]} qvqlvqsgaevkkpgasvkvscqasgyrfsnfvihwvrqapgqrfewmgwinpyngnkef sakfqdrvtftadtsantaymelrslrsadtavyycarvgpyswddspqdnyymdvwgkg ttvivss
Timeline for d1n0xk1: