Lineage for d1mj8h1 (1mj8 H:6-113)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2344610Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2344816Protein Immunoglobulin heavy chain variable domain, VH [88543] (22 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2345323Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (184 PDB entries)
    Uniprot P01756 1-117 # 78% sequense identity; HV12_MOUSE Ig heavy chain V region MOPC 104E ! SQ NA # humanized antibody ! Uniprot P01750 # HV06_MOUSE Ig heavy chain V region 102 precursor ! Uniprot P01750 20-116 # ! HV06_MOUSE Ig heavy chain V region 102 precursor
  8. 2345332Domain d1mj8h1: 1mj8 H:6-113 [91290]
    Other proteins in same PDB: d1mj8h2, d1mj8h3, d1mj8l1, d1mj8l2
    part of the esterolytic Fab ms6-164
    complexed with gol, po4

Details for d1mj8h1

PDB Entry: 1mj8 (more details), 1.75 Å

PDB Description: High Resolution Crystal Structure Of The Fab Fragment of The Esterolytic Antibody MS6-126
PDB Compounds: (H:) immunoglobulin ms6-126

SCOPe Domain Sequences for d1mj8h1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1mj8h1 b.1.1.1 (H:6-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

SCOPe Domain Coordinates for d1mj8h1:

Click to download the PDB-style file with coordinates for d1mj8h1.
(The format of our PDB-style files is described here.)

Timeline for d1mj8h1: