Lineage for d1mexl1 (1mex L:1-107)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 546420Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)
  6. 547289Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 547739Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (170 PDB entries)
  8. 547741Domain d1mexl1: 1mex L:1-107 [91259]
    Other proteins in same PDB: d1mexh1, d1mexh2, d1mexl2
    part of Fab 29g12
    complexed with rac

Details for d1mexl1

PDB Entry: 1mex (more details), 1.25 Å

PDB Description: Antibody Catalysis of a Bimolecular Cycloaddition Reaction

SCOP Domain Sequences for d1mexl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1mexl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
divmtqsqkfmstslgnrvsvtckasqnvgtnvawfqqkpgqspktliysasyrysgvpd
rftgsgsgtdftltinnvqsedlaeyfcqqynsypytfgggtkleik

SCOP Domain Coordinates for d1mexl1:

Click to download the PDB-style file with coordinates for d1mexl1.
(The format of our PDB-style files is described here.)

Timeline for d1mexl1:

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Domains from same chain:
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d1mexl2