Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.111: Activating enzymes of the ubiquitin-like proteins [69571] (1 superfamily) 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 32145678; strands 6 and 8 are antiparallel to the rest |
Superfamily c.111.1: Activating enzymes of the ubiquitin-like proteins [69572] (3 families) transfer adenylyl group to the C-terminal carboxyl group of the ubiquitin and MoaD/ThiS-related proteins the ATP nucleotide-binding site is similar to that of the NAD-binding Rossmann-folds |
Family c.111.1.2: Ubiquitin activating enzymes (UBA) [89763] (3 proteins) the common fold is elaborated with additional (sub)domains |
Protein Amyloid beta precursor protein-binding protein 1, APPBP1 [89766] (1 species) a subunit of the heterodimeric E1 enzyme for NEDD8; contains a large insertion (residues 170-487) that can be divided into 3 units similar to the UBA3 insertion |
Species Human (Homo sapiens) [TaxId:9606] [89767] (10 PDB entries) Uniprot Q13564 |
Domain d1ngva_: 1ngv A: [302766] Other proteins in same PDB: d1ngvb_, d1ngvd_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d1ngvc_: 1ngv C: [302768] Other proteins in same PDB: d1ngvb_, d1ngvd_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d1r4ma_: 1r4m A: [96999] Other proteins in same PDB: d1r4mb_, d1r4md_, d1r4mf_, d1r4mh_, d1r4mi_, d1r4mj_, d1r4mk_, d1r4ml_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d1r4mc_: 1r4m C: [97001] Other proteins in same PDB: d1r4mb_, d1r4md_, d1r4mf_, d1r4mh_, d1r4mi_, d1r4mj_, d1r4mk_, d1r4ml_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d1r4me_: 1r4m E: [97003] Other proteins in same PDB: d1r4mb_, d1r4md_, d1r4mf_, d1r4mh_, d1r4mi_, d1r4mj_, d1r4mk_, d1r4ml_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d1r4mg_: 1r4m G: [97005] Other proteins in same PDB: d1r4mb_, d1r4md_, d1r4mf_, d1r4mh_, d1r4mi_, d1r4mj_, d1r4mk_, d1r4ml_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d1r4na_: 1r4n A: [97011] Other proteins in same PDB: d1r4nb_, d1r4nd_, d1r4nf_, d1r4nh_, d1r4ni_, d1r4nj_, d1r4nk_, d1r4nl_ complexed with atp, zn has additional subdomain(s) that are not in the common domain |
Domain d1r4nc_: 1r4n C: [97013] Other proteins in same PDB: d1r4nb_, d1r4nd_, d1r4nf_, d1r4nh_, d1r4ni_, d1r4nj_, d1r4nk_, d1r4nl_ complexed with atp, zn has additional subdomain(s) that are not in the common domain |
Domain d1r4ne_: 1r4n E: [97015] Other proteins in same PDB: d1r4nb_, d1r4nd_, d1r4nf_, d1r4nh_, d1r4ni_, d1r4nj_, d1r4nk_, d1r4nl_ complexed with atp, zn has additional subdomain(s) that are not in the common domain |
Domain d1r4ng_: 1r4n G: [97017] Other proteins in same PDB: d1r4nb_, d1r4nd_, d1r4nf_, d1r4nh_, d1r4ni_, d1r4nj_, d1r4nk_, d1r4nl_ complexed with atp, zn has additional subdomain(s) that are not in the common domain |
Domain d1tt5a_: 1tt5 A: [107291] Other proteins in same PDB: d1tt5b1, d1tt5b2, d1tt5d_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d1tt5c_: 1tt5 C: [107293] Other proteins in same PDB: d1tt5b1, d1tt5b2, d1tt5d_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d1yova_: 1yov A: [123785] Other proteins in same PDB: d1yovb_, d1yovd_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d1yovc_: 1yov C: [123787] Other proteins in same PDB: d1yovb_, d1yovd_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dbha_: 3dbh A: [157468] Other proteins in same PDB: d3dbhb1, d3dbhb2, d3dbhd1, d3dbhd2, d3dbhf1, d3dbhf2, d3dbhh1, d3dbhh2, d3dbhi2, d3dbhi3, d3dbhj_, d3dbhk_, d3dbhl_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dbhc_: 3dbh C: [157469] Other proteins in same PDB: d3dbhb1, d3dbhb2, d3dbhd1, d3dbhd2, d3dbhf1, d3dbhf2, d3dbhh1, d3dbhh2, d3dbhi2, d3dbhi3, d3dbhj_, d3dbhk_, d3dbhl_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dbhe_: 3dbh E: [157470] Other proteins in same PDB: d3dbhb1, d3dbhb2, d3dbhd1, d3dbhd2, d3dbhf1, d3dbhf2, d3dbhh1, d3dbhh2, d3dbhi2, d3dbhi3, d3dbhj_, d3dbhk_, d3dbhl_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dbhg_: 3dbh G: [157471] Other proteins in same PDB: d3dbhb1, d3dbhb2, d3dbhd1, d3dbhd2, d3dbhf1, d3dbhf2, d3dbhh1, d3dbhh2, d3dbhi2, d3dbhi3, d3dbhj_, d3dbhk_, d3dbhl_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dbla_: 3dbl A: [157473] Other proteins in same PDB: d3dblb2, d3dblb3, d3dbld2, d3dbld3, d3dblf2, d3dblf3, d3dblh2, d3dblh3, d3dbli2, d3dbli3, d3dblj_, d3dblk_, d3dbll_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dblc_: 3dbl C: [157475] Other proteins in same PDB: d3dblb2, d3dblb3, d3dbld2, d3dbld3, d3dblf2, d3dblf3, d3dblh2, d3dblh3, d3dbli2, d3dbli3, d3dblj_, d3dblk_, d3dbll_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dble_: 3dbl E: [157477] Other proteins in same PDB: d3dblb2, d3dblb3, d3dbld2, d3dbld3, d3dblf2, d3dblf3, d3dblh2, d3dblh3, d3dbli2, d3dbli3, d3dblj_, d3dblk_, d3dbll_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dblg_: 3dbl G: [157479] Other proteins in same PDB: d3dblb2, d3dblb3, d3dbld2, d3dbld3, d3dblf2, d3dblf3, d3dblh2, d3dblh3, d3dbli2, d3dbli3, d3dblj_, d3dblk_, d3dbll_ automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dbra_: 3dbr A: [157482] Other proteins in same PDB: d3dbrb1, d3dbrb2, d3dbrd1, d3dbrd2, d3dbrf1, d3dbrf2, d3dbrh1, d3dbrh2, d3dbri1, d3dbri2, d3dbrj1, d3dbrj2, d3dbrk1, d3dbrk2, d3dbrl1, d3dbrl2 automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dbrc_: 3dbr C: [157483] Other proteins in same PDB: d3dbrb1, d3dbrb2, d3dbrd1, d3dbrd2, d3dbrf1, d3dbrf2, d3dbrh1, d3dbrh2, d3dbri1, d3dbri2, d3dbrj1, d3dbrj2, d3dbrk1, d3dbrk2, d3dbrl1, d3dbrl2 automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dbre_: 3dbr E: [157484] Other proteins in same PDB: d3dbrb1, d3dbrb2, d3dbrd1, d3dbrd2, d3dbrf1, d3dbrf2, d3dbrh1, d3dbrh2, d3dbri1, d3dbri2, d3dbrj1, d3dbrj2, d3dbrk1, d3dbrk2, d3dbrl1, d3dbrl2 automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3dbrg_: 3dbr G: [157485] Other proteins in same PDB: d3dbrb1, d3dbrb2, d3dbrd1, d3dbrd2, d3dbrf1, d3dbrf2, d3dbrh1, d3dbrh2, d3dbri1, d3dbri2, d3dbrj1, d3dbrj2, d3dbrk1, d3dbrk2, d3dbrl1, d3dbrl2 automated match to d1tt5a_ complexed with zn has additional subdomain(s) that are not in the common domain |
Domain d3gzna_: 3gzn A: [246396] Other proteins in same PDB: d3gznb_, d3gznd_, d3gzni1, d3gzni2, d3gznj1, d3gznj2 automated match to d1tt5a_ complexed with b39, zn has additional subdomain(s) that are not in the common domain |
Domain d3gznc_: 3gzn C: [246398] Other proteins in same PDB: d3gznb_, d3gznd_, d3gzni1, d3gzni2, d3gznj1, d3gznj2 automated match to d1tt5a_ complexed with b39, zn has additional subdomain(s) that are not in the common domain |
Timeline for Species Human (Homo sapiens) [TaxId:9606] from c.111.1.2 Amyloid beta precursor protein-binding protein 1, APPBP1: