Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1361462Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 1361463Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 1361611Family c.36.1.6: TK-like Pyr module [88735] (2 proteins)
    different order of the modules, PP module is N-terminal, Pyr module is next to it followed by a Rossmann-like domain
  6. 1361630Protein Transketolase (TK), Pyr module [88736] (4 species)
  7. 1361646Species Escherichia coli [TaxId:562] [89650] (4 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1qgd:
    1. 1361653Domain d1qgda1: 1qgd A:333-527 [88367]
      Other proteins in same PDB: d1qgda2, d1qgda3, d1qgdb2, d1qgdb3
      complexed with ca, so4, tpp
    2. 1361654Domain d1qgdb1: 1qgd B:333-527 [88370]
      Other proteins in same PDB: d1qgda2, d1qgda3, d1qgdb2, d1qgdb3
      complexed with ca, so4, tpp
  2. Domain(s) for 2r5n:
    1. 1361649Domain d2r5na1: 2r5n A:333-527 [151591]
      Other proteins in same PDB: d2r5na2, d2r5na3, d2r5nb2, d2r5nb3
      automatically matched to d1qgda1
      complexed with ca, edo, r5p, rp5, tpp
    2. 1361650Domain d2r5nb1: 2r5n B:333-527 [151594]
      Other proteins in same PDB: d2r5na2, d2r5na3, d2r5nb2, d2r5nb3
      automatically matched to d1qgda1
      complexed with ca, edo, r5p, rp5, tpp
  3. Domain(s) for 2r8o:
    1. 1361647Domain d2r8oa1: 2r8o A:333-527 [151731]
      Other proteins in same PDB: d2r8oa2, d2r8oa3, d2r8ob2, d2r8ob3
      automatically matched to d1qgda1
      complexed with ca, edo, t5x
    2. 1361648Domain d2r8ob1: 2r8o B:333-527 [151734]
      Other proteins in same PDB: d2r8oa2, d2r8oa3, d2r8ob2, d2r8ob3
      automatically matched to d1qgda1
      complexed with ca, edo, t5x
  4. Domain(s) for 2r8p:
    1. 1361651Domain d2r8pa1: 2r8p A:333-527 [151737]
      Other proteins in same PDB: d2r8pa2, d2r8pa3, d2r8pb2, d2r8pb3
      automatically matched to d1qgda1
      complexed with ca, edo, t6f
    2. 1361652Domain d2r8pb1: 2r8p B:333-527 [151740]
      Other proteins in same PDB: d2r8pa2, d2r8pa3, d2r8pb2, d2r8pb3
      automatically matched to d1qgda1
      complexed with ca, edo, t6f

More info for Species Escherichia coli [TaxId:562] from c.36.1.6 Transketolase (TK), Pyr module

Timeline for Species Escherichia coli [TaxId:562] from c.36.1.6 Transketolase (TK), Pyr module: