Lineage for Species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2851636Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. 2851637Superfamily c.10.1: RNI-like [52047] (4 families) (S)
    regular structure consisting of similar repeats
  5. 2851638Family c.10.1.1: 28-residue LRR [52048] (3 proteins)
    this is a repeat family; one repeat unit is 1a4y A:207-235 found in domain
  6. 2851646Protein Tropomodulin C-terminal domain [82322] (2 species)
    duplication: consists of 5 repeats
  7. 2851649Species Nematode (Caenorhabditis elegans) [TaxId:6239] [89566] (1 PDB entry)

PDB entry in Species: Nematode (Caenorhabditis elegans) [TaxId: 6239]:

  • Domain(s) for 1pgv:
    • 2851650Domain d1pgva_: 1pgv A: [88073]
      structural genomics
      applies to all domains of a family if the common domain is composed of a different number of small repeating units

More info for Species Nematode (Caenorhabditis elegans) [TaxId:6239] from c.10.1.1 Tropomodulin C-terminal domain

Timeline for Species Nematode (Caenorhabditis elegans) [TaxId:6239] from c.10.1.1 Tropomodulin C-terminal domain: