Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.6: PLP-binding barrel [51419] (2 families) circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand |
Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins) |
Protein Diaminopimelate decarboxylase LysA [89457] (3 species) most similar to eukaryotic ODC |
Escherichia coli [TaxId:562] [102048] (2 PDB entries) |
Domain d1knwa2: 1knw A:32-278 [90970] Other proteins in same PDB: d1knwa1 complexed with li, mes, plp, so4 |
Domain d1ko0a2: 1ko0 A:32-278 [90972] Other proteins in same PDB: d1ko0a1 complexed with lys, plp |
Methanococcus jannaschii [TaxId:2190] [110347] (2 PDB entries) Uniprot Q58497 |
Domain d1tufa2: 1tuf A:50-313 [107336] Other proteins in same PDB: d1tufa1, d1tufb1 Structural genomics target complexed with az1 |
Domain d1tufb2: 1tuf B:50-313 [107338] Other proteins in same PDB: d1tufa1, d1tufb1 Structural genomics target complexed with az1 |
Domain d1twia2: 1twi A:50-313 [107400] Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1 Structural genomics target complexed with lys, mg, plp |
Domain d1twib2: 1twi B:50-313 [107402] Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1 Structural genomics target complexed with lys, mg, plp |
Domain d1twic2: 1twi C:50-313 [107404] Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1 Structural genomics target complexed with lys, mg, plp |
Domain d1twid2: 1twi D:50-313 [107406] Other proteins in same PDB: d1twia1, d1twib1, d1twic1, d1twid1 Structural genomics target complexed with lys, mg, plp |
Mycobacterium tuberculosis [TaxId:1773] [89458] (2 PDB entries) |
Domain d1hkva2: 1hkv A:46-310 [83560] Other proteins in same PDB: d1hkva1, d1hkvb1 complexed with lys, plp |
Domain d1hkvb2: 1hkv B:46-310 [83562] Other proteins in same PDB: d1hkva1, d1hkvb1 complexed with lys, plp |
Domain d1hkwa2: 1hkw A:46-310 [83564] Other proteins in same PDB: d1hkwa1, d1hkwb1 complexed with so4 |
Domain d1hkwb2: 1hkw B:46-310 [83566] Other proteins in same PDB: d1hkwa1, d1hkwb1 complexed with so4 |
Timeline for Protein Diaminopimelate decarboxylase LysA from c.1.6.1: Alanine racemase-like, N-terminal domain: