Lineage for Protein: Diaminopimelate decarboxylase LysA

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 383642Fold c.1: TIM beta/alpha-barrel [51350] (28 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 384215Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 384216Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)
  6. 384235Protein Diaminopimelate decarboxylase LysA [89457] (2 species)
    most similar to eukaryotic ODC

Species:

  1. 384236Escherichia coli [TaxId:562] [102048] (2 PDB entries)
    1. Domain for 1knw:
    2. Domain for 1ko0:
  2. 384239Mycobacterium tuberculosis [TaxId:1773] [89458] (2 PDB entries)
    1. Domains for 1hkv:
      1. 384240Domain d1hkva2: 1hkv A:46-310 [83560]
        Other proteins in same PDB: d1hkva1, d1hkvb1
      2. 384241Domain d1hkvb2: 1hkv B:46-310 [83562]
        Other proteins in same PDB: d1hkva1, d1hkvb1
        complexed with lys, plp
    2. Domains for 1hkw:
      1. 384242Domain d1hkwa2: 1hkw A:46-310 [83564]
        Other proteins in same PDB: d1hkwa1, d1hkwb1
      2. 384243Domain d1hkwb2: 1hkw B:46-310 [83566]
        Other proteins in same PDB: d1hkwa1, d1hkwb1
        complexed with mse, so4

More info for Protein Diaminopimelate decarboxylase LysA from c.1.6.1: Alanine racemase-like, N-terminal domain

Timeline for Protein Diaminopimelate decarboxylase LysA from c.1.6.1: Alanine racemase-like, N-terminal domain: