SCOPe 2.07: Species: Desulfovibrio desulfuricans [TaxId: 876]

Lineage for Species: Desulfovibrio desulfuricans [TaxId: 876]

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.25: Ferritin-like [47239] (6 superfamilies)
core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
Superfamily a.25.1: Ferritin-like [47240] (10 families)
contains bimetal-ion centre in the middle of the bundle
Family a.25.1.1: Ferritin [47241] (10 proteins)
Protein Bacterioferritin (cytochrome b1) [47244] (6 species)
binds heme between two subunits; 24-mer
Species Desulfovibrio desulfuricans [TaxId:876] [89025] (3 PDB entries)

PDB entries in Species: Desulfovibrio desulfuricans [TaxId: 876]:

Domain(s) for 1nf4:
1. Domain d1nf4a_: 1nf4 A: [85598]
  complexed with fe2, fec, so4
2. Domain d1nf4b_: 1nf4 B: [85599]
  complexed with fe2, fec, so4
3. Domain d1nf4c_: 1nf4 C: [85600]
  complexed with fe2, fec, so4
4. Domain d1nf4d_: 1nf4 D: [85601]
  complexed with fe2, fec, so4
5. Domain d1nf4e_: 1nf4 E: [85602]
  complexed with fe2, fec, so4
6. Domain d1nf4f_: 1nf4 F: [85603]
  complexed with fe2, fec, so4
7. Domain d1nf4g_: 1nf4 G: [85604]
  complexed with fe2, fec, so4
8. Domain d1nf4h_: 1nf4 H: [85605]
  complexed with fe2, fec, so4
9. Domain d1nf4i_: 1nf4 I: [85606]
  complexed with fe2, fec, so4
10. Domain d1nf4j_: 1nf4 J: [85607]
  complexed with fe2, fec, so4
11. Domain d1nf4k_: 1nf4 K: [85608]
  complexed with fe2, fec, so4
12. Domain d1nf4l_: 1nf4 L: [85609]
  complexed with fe2, fec, so4
13. Domain d1nf4m_: 1nf4 M: [85610]
  complexed with fe2, fec, so4
14. Domain d1nf4n_: 1nf4 N: [85611]
  complexed with fe2, fec, so4
15. Domain d1nf4o_: 1nf4 O: [85612]
  complexed with fe2, fec, so4
16. Domain d1nf4p_: 1nf4 P: [85613]
  complexed with fe2, fec, so4
Domain(s) for 1nf6:
1. Domain d1nf6a_: 1nf6 A: [85614]
  complexed with fe, fec, gol, so4
2. Domain d1nf6b_: 1nf6 B: [85615]
  complexed with fe, fec, gol, so4
3. Domain d1nf6c_: 1nf6 C: [85616]
  complexed with fe, fec, gol, so4
4. Domain d1nf6d_: 1nf6 D: [85617]
  complexed with fe, fec, gol, so4
5. Domain d1nf6e_: 1nf6 E: [85618]
  complexed with fe, fec, gol, so4
6. Domain d1nf6f_: 1nf6 F: [85619]
  complexed with fe, fec, gol, so4
7. Domain d1nf6g_: 1nf6 G: [85620]
  complexed with fe, fec, gol, so4
8. Domain d1nf6h_: 1nf6 H: [85621]
  complexed with fe, fec, gol, so4
9. Domain d1nf6i_: 1nf6 I: [85622]
  complexed with fe, fec, gol, so4
10. Domain d1nf6j_: 1nf6 J: [85623]
  complexed with fe, fec, gol, so4
11. Domain d1nf6k_: 1nf6 K: [85624]
  complexed with fe, fec, gol, so4
12. Domain d1nf6l_: 1nf6 L: [85625]
  complexed with fe, fec, gol, so4
13. Domain d1nf6m_: 1nf6 M: [85626]
  complexed with fe, fec, gol, so4
14. Domain d1nf6n_: 1nf6 N: [85627]
  complexed with fe, fec, gol, so4
15. Domain d1nf6o_: 1nf6 O: [85628]
  complexed with fe, fec, gol, so4
16. Domain d1nf6p_: 1nf6 P: [85629]
  complexed with fe, fec, gol, so4
Domain(s) for 1nfv:
1. Domain d1nfva_: 1nfv A: [85642]
  complexed with 3py, fe, fec, gol, so4
2. Domain d1nfvb_: 1nfv B: [85643]
  complexed with 3py, fe, fec, gol, so4
3. Domain d1nfvc_: 1nfv C: [85644]
  complexed with 3py, fe, fec, gol, so4
4. Domain d1nfvd_: 1nfv D: [85645]
  complexed with 3py, fe, fec, gol, so4
5. Domain d1nfve_: 1nfv E: [85646]
  complexed with 3py, fe, fec, gol, so4
6. Domain d1nfvf_: 1nfv F: [85647]
  complexed with 3py, fe, fec, gol, so4
7. Domain d1nfvg_: 1nfv G: [85648]
  complexed with 3py, fe, fec, gol, so4
8. Domain d1nfvh_: 1nfv H: [85649]
  complexed with 3py, fe, fec, gol, so4
9. Domain d1nfvi_: 1nfv I: [85650]
  complexed with 3py, fe, fec, gol, so4
10. Domain d1nfvj_: 1nfv J: [85651]
  complexed with 3py, fe, fec, gol, so4
11. Domain d1nfvk_: 1nfv K: [85652]
  complexed with 3py, fe, fec, gol, so4
12. Domain d1nfvl_: 1nfv L: [85653]
  complexed with 3py, fe, fec, gol, so4
13. Domain d1nfvm_: 1nfv M: [85654]
  complexed with 3py, fe, fec, gol, so4
14. Domain d1nfvn_: 1nfv N: [85655]
  complexed with 3py, fe, fec, gol, so4
15. Domain d1nfvo_: 1nfv O: [85656]
  complexed with 3py, fe, fec, gol, so4
16. Domain d1nfvp_: 1nfv P: [85657]
  complexed with 3py, fe, fec, gol, so4

More info for Species Desulfovibrio desulfuricans [TaxId:876] from a.25.1.1 Bacterioferritin (cytochrome b1)

Timeline for Species Desulfovibrio desulfuricans [TaxId:876] from a.25.1.1 Bacterioferritin (cytochrome b1):

Species Desulfovibrio desulfuricans [TaxId:876] from a.25.1.1 Bacterioferritin (cytochrome b1) first appeared in SCOP 1.65
Species Desulfovibrio desulfuricans [TaxId:876] from a.25.1.1 Bacterioferritin (cytochrome b1) appears in SCOPe 2.06
Species Desulfovibrio desulfuricans [TaxId:876] from a.25.1.1 Bacterioferritin (cytochrome b1) appears in the current release, SCOPe 2.08