SCOPe 2.08: Family d.110.3.6: Flavin-binding PAS domain

Lineage for Family d.110.3.6: Flavin-binding PAS domain

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.110: Profilin-like [55769] (10 superfamilies)
   core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha

4. Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families)
   alpha-beta(2)-alpha(2)-beta(3)

5. Family d.110.3.6: Flavin-binding PAS domain [88853] (4 proteins)
   contains PAC motif

Proteins:

1. Erg potassium channel, N-terminal domain [55794] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [55795] (1 PDB entry)

2. Photoreceptor phy3 flavin-binding domain, lov2 [64354] (1 species)

   • Species Maidenhair fern (Adiantum capillus-veneris) [TaxId:13818] [64355] (2 PDB entries)

3. Putative blue light receptor, phot-lov1 domain [90017] (1 species)

   • Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [90018] (3 PDB entries)

4. automated matches [190943] (2 species)
   not a true protein

   1. Species Human (Homo sapiens) [TaxId:9606] [196723] (5 PDB entries)

   2. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [188509] (20 PDB entries)

More info for Family d.110.3.6: Flavin-binding PAS domain

Timeline for Family d.110.3.6: Flavin-binding PAS domain:

• Family d.110.3.6: Flavin-binding PAS domain first appeared in SCOP 1.65, called Family d.110.3.6: flavin-binding PAS domain
  
• Family d.110.3.6: Flavin-binding PAS domain appears in SCOPe 2.07