SCOPe 2.05: Species: Methylococcus capsulatus [TaxId: 414]

Lineage for Species: Methylococcus capsulatus [TaxId: 414]

Root: SCOPe 2.05
Class a: All alpha proteins [46456] (286 folds)
Fold a.25: Ferritin-like [47239] (6 superfamilies)
core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
Superfamily a.25.1: Ferritin-like [47240] (10 families)
contains bimetal-ion centre in the middle of the bundle
Family a.25.1.2: Ribonucleotide reductase-like [47253] (9 proteins)
Protein Methane monooxygenase hydrolase beta subunit [88792] (2 species)
Species Methylococcus capsulatus [TaxId:414] [88793] (27 PDB entries)

PDB entries in Species: Methylococcus capsulatus [TaxId: 414]:

Domain(s) for 1fyz:
1. Domain d1fyzc_: 1fyz C: [16762]
  Other proteins in same PDB: d1fyza_, d1fyzb_, d1fyze_, d1fyzf_
  complexed with ca, fe2
2. Domain d1fyzd_: 1fyz D: [16763]
  Other proteins in same PDB: d1fyza_, d1fyzb_, d1fyze_, d1fyzf_
  complexed with ca, fe2
Domain(s) for 1fz0:
1. Domain d1fz0c_: 1fz0 C: [16758]
  Other proteins in same PDB: d1fz0a_, d1fz0b_, d1fz0e_, d1fz0f_
  complexed with ca, fe2
2. Domain d1fz0d_: 1fz0 D: [16759]
  Other proteins in same PDB: d1fz0a_, d1fz0b_, d1fz0e_, d1fz0f_
  complexed with ca, fe2
Domain(s) for 1fz1:
1. Domain d1fz1c_: 1fz1 C: [16746]
  Other proteins in same PDB: d1fz1a_, d1fz1b_, d1fz1e_, d1fz1f_
  complexed with ca, fe, fmt
2. Domain d1fz1d_: 1fz1 D: [16747]
  Other proteins in same PDB: d1fz1a_, d1fz1b_, d1fz1e_, d1fz1f_
  complexed with ca, fe, fmt
Domain(s) for 1fz2:
1. Domain d1fz2c_: 1fz2 C: [16766]
  Other proteins in same PDB: d1fz2a_, d1fz2b_, d1fz2e_, d1fz2f_
  complexed with ca, fe2
2. Domain d1fz2d_: 1fz2 D: [16767]
  Other proteins in same PDB: d1fz2a_, d1fz2b_, d1fz2e_, d1fz2f_
  complexed with ca, fe2
Domain(s) for 1fz3:
1. Domain d1fz3c_: 1fz3 C: [16750]
  Other proteins in same PDB: d1fz3a_, d1fz3b_, d1fz3e_, d1fz3f_
  complexed with ca, fe, fmt
2. Domain d1fz3d_: 1fz3 D: [16751]
  Other proteins in same PDB: d1fz3a_, d1fz3b_, d1fz3e_, d1fz3f_
  complexed with ca, fe, fmt
Domain(s) for 1fz4:
1. Domain d1fz4c_: 1fz4 C: [16774]
  Other proteins in same PDB: d1fz4a_, d1fz4b_, d1fz4e_, d1fz4f_
  complexed with ca, fe, fmt
2. Domain d1fz4d_: 1fz4 D: [16775]
  Other proteins in same PDB: d1fz4a_, d1fz4b_, d1fz4e_, d1fz4f_
  complexed with ca, fe, fmt
Domain(s) for 1fz5:
1. Domain d1fz5c_: 1fz5 C: [16778]
  Other proteins in same PDB: d1fz5a_, d1fz5b_, d1fz5e_, d1fz5f_
  complexed with ca, fe2
2. Domain d1fz5d_: 1fz5 D: [16779]
  Other proteins in same PDB: d1fz5a_, d1fz5b_, d1fz5e_, d1fz5f_
  complexed with ca, fe2
Domain(s) for 1fz6:
1. Domain d1fz6c_: 1fz6 C: [60118]
  Other proteins in same PDB: d1fz6a_, d1fz6b_, d1fz6e_, d1fz6f_
  complexed with ca, fe, moh
2. Domain d1fz6d_: 1fz6 D: [60119]
  Other proteins in same PDB: d1fz6a_, d1fz6b_, d1fz6e_, d1fz6f_
  complexed with ca, fe, moh
Domain(s) for 1fz7:
1. Domain d1fz7c_: 1fz7 C: [16754]
  Other proteins in same PDB: d1fz7a_, d1fz7b_, d1fz7e_, d1fz7f_
  complexed with ca, eoh, fe, fmt
2. Domain d1fz7d_: 1fz7 D: [16755]
  Other proteins in same PDB: d1fz7a_, d1fz7b_, d1fz7e_, d1fz7f_
  complexed with ca, eoh, fe, fmt
Domain(s) for 1fz8:
1. Domain d1fz8c_: 1fz8 C: [60124]
  Other proteins in same PDB: d1fz8a_, d1fz8b_, d1fz8e_, d1fz8f_
  complexed with 2bm, ca, fe
2. Domain d1fz8d_: 1fz8 D: [60125]
  Other proteins in same PDB: d1fz8a_, d1fz8b_, d1fz8e_, d1fz8f_
  complexed with 2bm, ca, fe
Domain(s) for 1fz9:
1. Domain d1fz9c_: 1fz9 C: [60130]
  Other proteins in same PDB: d1fz9a_, d1fz9b_, d1fz9e_, d1fz9f_
  complexed with ca, eti, fe
2. Domain d1fz9d_: 1fz9 D: [60131]
  Other proteins in same PDB: d1fz9a_, d1fz9b_, d1fz9e_, d1fz9f_
  complexed with ca, eti, fe
Domain(s) for 1fzh:
1. Domain d1fzhc_: 1fzh C: [60136]
  Other proteins in same PDB: d1fzha_, d1fzhb_, d1fzhe_, d1fzhf_
  complexed with ca, fe, xe
2. Domain d1fzhd_: 1fzh D: [60137]
  Other proteins in same PDB: d1fzha_, d1fzhb_, d1fzhe_, d1fzhf_
  complexed with ca, fe, xe
Domain(s) for 1fzi:
1. Domain d1fzic_: 1fzi C: [60142]
  Other proteins in same PDB: d1fzia_, d1fzib_, d1fzie_, d1fzif_
  complexed with fe, xe
2. Domain d1fzid_: 1fzi D: [60143]
  Other proteins in same PDB: d1fzia_, d1fzib_, d1fzie_, d1fzif_
  complexed with fe, xe
Domain(s) for 1mmo:
1. Domain d1mmob_: 1mmo B: [16768]
  Other proteins in same PDB: d1mmod_, d1mmoe_, d1mmog_, d1mmoh_
  complexed with acy, fe
2. Domain d1mmoc_: 1mmo C: [16769]
  Other proteins in same PDB: d1mmod_, d1mmoe_, d1mmog_, d1mmoh_
  complexed with acy, fe
Domain(s) for 1mty:
1. Domain d1mtyb_: 1mty B: [16740]
  Other proteins in same PDB: d1mtyd_, d1mtye_, d1mtyg_, d1mtyh_
  complexed with fe
2. Domain d1mtyc_: 1mty C: [16741]
  Other proteins in same PDB: d1mtyd_, d1mtye_, d1mtyg_, d1mtyh_
  complexed with fe
Domain(s) for 1xmf:
1. Domain d1xmfc1: 1xmf C:2-389 [122149]
  Other proteins in same PDB: d1xmfa_, d1xmfb_, d1xmfe_, d1xmff_
  complexed with ca, mn
2. Domain d1xmfd_: 1xmf D: [122150]
  Other proteins in same PDB: d1xmfa_, d1xmfb_, d1xmfe_, d1xmff_
  automated match to d1fyzc_
  complexed with ca, mn
Domain(s) for 1xmg:
1. Domain d1xmgc_: 1xmg C: [122155]
  Other proteins in same PDB: d1xmga_, d1xmgb_, d1xmge_, d1xmgf_
  automated match to d1fyzc_
  complexed with ca
2. Domain d1xmgd_: 1xmg D: [122156]
  Other proteins in same PDB: d1xmga_, d1xmgb_, d1xmge_, d1xmgf_
  automated match to d1fyzc_
  complexed with ca
Domain(s) for 1xmh:
1. Domain d1xmhc_: 1xmh C: [122161]
  Other proteins in same PDB: d1xmha_, d1xmhb_, d1xmhe_, d1xmhf_
  automated match to d1fyzc_
  complexed with co
2. Domain d1xmhd_: 1xmh D: [122162]
  Other proteins in same PDB: d1xmha_, d1xmhb_, d1xmhe_, d1xmhf_
  automated match to d1fyzc_
  complexed with co
Domain(s) for 1xu3:
1. Domain d1xu3c_: 1xu3 C: [122322]
  Other proteins in same PDB: d1xu3a_, d1xu3b_, d1xu3e_, d1xu3f_
  automated match to d1fyzc_
  complexed with bml, fe
2. Domain d1xu3d_: 1xu3 D: [122323]
  Other proteins in same PDB: d1xu3a_, d1xu3b_, d1xu3e_, d1xu3f_
  automated match to d1fyzc_
  complexed with bml, fe
Domain(s) for 1xu5:
1. Domain d1xu5c_: 1xu5 C: [122328]
  Other proteins in same PDB: d1xu5a_, d1xu5b_, d1xu5e_, d1xu5f_
  automated match to d1fyzc_
  complexed with fe, iph, oh
2. Domain d1xu5d_: 1xu5 D: [122329]
  Other proteins in same PDB: d1xu5a_, d1xu5b_, d1xu5e_, d1xu5f_
  automated match to d1fyzc_
  complexed with fe, iph, oh
Domain(s) for 1xvb:
1. Domain d1xvbc_: 1xvb C: [122346]
  Other proteins in same PDB: d1xvba_, d1xvbb_, d1xvbe_, d1xvbf_
  automated match to d1fyzc_
  complexed with 3br, bbu, bbx, bhl, ca, fe
2. Domain d1xvbd_: 1xvb D: [122347]
  Other proteins in same PDB: d1xvba_, d1xvbb_, d1xvbe_, d1xvbf_
  automated match to d1fyzc_
  complexed with 3br, bbu, bbx, bhl, ca, fe
Domain(s) for 1xvc:
1. Domain d1xvcc_: 1xvc C: [122352]
  Other proteins in same PDB: d1xvca_, d1xvcb_, d1xvce_, d1xvcf_
  automated match to d1fyzc_
  complexed with 5br, bmm, br, fe, fmt
2. Domain d1xvcd_: 1xvc D: [122353]
  Other proteins in same PDB: d1xvca_, d1xvcb_, d1xvce_, d1xvcf_
  automated match to d1fyzc_
  complexed with 5br, bmm, br, fe, fmt
Domain(s) for 1xvd:
1. Domain d1xvdc_: 1xvd C: [122358]
  Other proteins in same PDB: d1xvda_, d1xvdb_, d1xvde_, d1xvdf_
  automated match to d1fyzc_
  complexed with fe, fpn
2. Domain d1xvdd_: 1xvd D: [122359]
  Other proteins in same PDB: d1xvda_, d1xvdb_, d1xvde_, d1xvdf_
  automated match to d1fyzc_
  complexed with fe, fpn
Domain(s) for 1xve:
1. Domain d1xvec_: 1xve C: [122364]
  Other proteins in same PDB: d1xvea_, d1xveb_, d1xvee_, d1xvef_
  automated match to d1fyzc_
  complexed with 3bb, ca, fe
2. Domain d1xved_: 1xve D: [122365]
  Other proteins in same PDB: d1xvea_, d1xveb_, d1xvee_, d1xvef_
  automated match to d1fyzc_
  complexed with 3bb, ca, fe
Domain(s) for 1xvf:
1. Domain d1xvfc_: 1xvf C: [122370]
  Other proteins in same PDB: d1xvfa_, d1xvfb_, d1xvfe_, d1xvff_
  automated match to d1fyzc_
  complexed with 3cl, fe
2. Domain d1xvfd_: 1xvf D: [122371]
  Other proteins in same PDB: d1xvfa_, d1xvfb_, d1xvfe_, d1xvff_
  automated match to d1fyzc_
  complexed with 3cl, fe
Domain(s) for 1xvg:
1. Domain d1xvgc_: 1xvg C: [122376]
  Other proteins in same PDB: d1xvga_, d1xvgb_, d1xvge_, d1xvgf_
  automated match to d1fyzc_
  complexed with brj, ca, fe
2. Domain d1xvgd_: 1xvg D: [122377]
  Other proteins in same PDB: d1xvga_, d1xvgb_, d1xvge_, d1xvgf_
  automated match to d1fyzc_
  complexed with brj, ca, fe

Domain(s) for 4gam:

Domain d4gamb_: 4gam B: [202223]
Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
automated match to d1fz1c_
complexed with fe

Domain d4gamg_: 4gam G: [202227]
Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
automated match to d1fz1c_
complexed with fe

Domain d4gaml_: 4gam L: [202231]
Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
automated match to d1fz1c_
complexed with fe

Domain d4gamq_: 4gam Q: [194032]
Other proteins in same PDB: d4gama_, d4gamc_, d4gamd_, d4gamf_, d4gamh_, d4gami_, d4gamk_, d4gamm_, d4gamn_, d4gamp_, d4gamr_, d4gams_
automated match to d1xmgc_
complexed with fe

More info for Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase beta subunit

Timeline for Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase beta subunit:

Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase beta subunit first appeared in SCOP 1.65
Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase beta subunit appears in SCOPe 2.04
Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase beta subunit appears in SCOPe 2.06
Species Methylococcus capsulatus [TaxId:414] from a.25.1.2 Methane monooxygenase hydrolase beta subunit appears in the current release, SCOPe 2.08