SCOP 1.65: Protein: Pyruvate-ferredoxin oxidoreductase, PFOR, domain I

Lineage for Protein: Pyruvate-ferredoxin oxidoreductase, PFOR, domain I

Root: SCOP 1.65
Class c: Alpha and beta proteins (a/b) [51349] (121 folds)
Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465

Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (8 families)

there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules

Family c.36.1.8: PFOR Pyr module [88746] (1 protein)
domains VI, I and II are arranged in the same way as the TK PP, Pyr and C domains
Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain I [88747] (1 species)

Species:

Desulfovibrio africanus [TaxId:873] [88748] (3 PDB entries)
1. Domains for 1b0p:
  1. Domain d1b0pa1: 1b0p A:2-258 [31831]
    Other proteins in same PDB: d1b0pa2, d1b0pa3, d1b0pa4, d1b0pa5, d1b0pb2, d1b0pb3, d1b0pb4, d1b0pb5
  2. Domain d1b0pb1: 1b0p B:2-258 [31833]
    Other proteins in same PDB: d1b0pa2, d1b0pa3, d1b0pa4, d1b0pa5, d1b0pb2, d1b0pb3, d1b0pb4, d1b0pb5
    complexed with ca, fs4, mg, tpp
2. Domains for 1kek:
  1. Domain d1keka1: 1kek A:2-258 [68524]
    Other proteins in same PDB: d1keka2, d1keka3, d1keka4, d1keka5, d1kekb2, d1kekb3, d1kekb4, d1kekb5
  2. Domain d1kekb1: 1kek B:2-258 [68529]
    Other proteins in same PDB: d1keka2, d1keka3, d1keka4, d1keka5, d1kekb2, d1kekb3, d1kekb4, d1kekb5
    complexed with ca, co2, fs4, htl, mg
3. Domains for 2pda:
  1. Domain d2pdaa1: 2pda A:2-258 [31835]
    Other proteins in same PDB: d2pdaa2, d2pdaa3, d2pdaa4, d2pdaa5, d2pdab2, d2pdab3, d2pdab4, d2pdab5
  2. Domain d2pdab1: 2pda B:2-258 [31837]
    Other proteins in same PDB: d2pdaa2, d2pdaa3, d2pdaa4, d2pdaa5, d2pdab2, d2pdab3, d2pdab4, d2pdab5
    complexed with ca, fs4, mg, pyr, tpp

More info for Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain I from c.36.1.8: PFOR Pyr module

Timeline for Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain I from c.36.1.8: PFOR Pyr module:

Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain I from c.36.1.8: PFOR Pyr module is new in SCOP 1.65
Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain I from c.36.1.8: PFOR Pyr module appears in SCOP 1.67
Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain I from c.36.1.8: PFOR Pyr module appears in the current release, SCOPe 2.08