SCOPe 2.05: Family b.49.2.3: Eukaryotic ODC-like

Lineage for Family b.49.2.3: Eukaryotic ODC-like

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.49: Domain of alpha and beta subunits of F1 ATP synthase-like [50614] (3 superfamilies)
   barrel, closed; n=6, S=8; greek-key

4. Superfamily b.49.2: Alanine racemase C-terminal domain-like [50621] (2 families)
   the barrel is decorated with additional structures

5. Family b.49.2.3: Eukaryotic ODC-like [88683] (2 proteins)
   barrel is open with strands 4 and 5 having swapped their positions, compared to the alanine racemase barrel

Proteins:

1. Diaminopimelate decarboxylase LysA [89350] (3 species)

   1. Species Escherichia coli [TaxId:562] [101820] (2 PDB entries)

   2. Species Methanococcus jannaschii [TaxId:2190] [110245] (2 PDB entries)
      Uniprot Q58497

   3. Species Mycobacterium tuberculosis [TaxId:1773] [89351] (2 PDB entries)

2. Eukaryotic ornithine decarboxylase (ODC) [50625] (3 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [50626] (1 PDB entry)

   2. Species Mouse (Mus musculus) [TaxId:10090] [50627] (1 PDB entry)

   3. Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [50628] (5 PDB entries)
      Uniprot P07805

More info for Family b.49.2.3: Eukaryotic ODC-like

Timeline for Family b.49.2.3: Eukaryotic ODC-like:

• Family b.49.2.3: Eukaryotic ODC-like first appeared in SCOP 1.65
  
• Family b.49.2.3: Eukaryotic ODC-like appears in SCOPe 2.04
  
• Family b.49.2.3: Eukaryotic ODC-like appears in SCOPe 2.06
  
• Family b.49.2.3: Eukaryotic ODC-like appears in the current release, SCOPe 2.08