Lineage for Family b.49.2.3: Eukaryotic ODC-like

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 562760Fold b.49: Domain of alpha and beta subunits of F1 ATP synthase-like [50614] (3 superfamilies)
    barrel, closed; n=6, S=8; greek-key
  4. 562853Superfamily b.49.2: Alanine racemase C-terminal domain-like [50621] (2 families) (S)
    the barrel is decorated with additional structures
  5. 562881Family b.49.2.3: Eukaryotic ODC-like [88683] (2 proteins)
    barrel is open with strands 4 and 5 having swapped their positions, compared to the alanine racemase barrel

Proteins:

  1. 562882Diaminopimelate decarboxylase LysA [89350] (3 species)
    1. 562883Species Archaeon Methanococcus jannaschii [TaxId:2190] [110245] (2 PDB entries)
    2. 562890Species Escherichia coli [TaxId:562] [101820] (2 PDB entries)
    3. 562893Species Mycobacterium tuberculosis [TaxId:1773] [89351] (2 PDB entries)
  2. 562898Eukaryotic ornithine decarboxylase (ODC) [50625] (3 species)
    1. 562899Species Human (Homo sapiens) [TaxId:9606] [50626] (1 PDB entry)
    2. 562902Species Mouse (Mus musculus) [TaxId:10090] [50627] (1 PDB entry)
    3. 562904Species Trypanosoma brucei [TaxId:5691] [50628] (5 PDB entries)

More info for Family b.49.2.3: Eukaryotic ODC-like

Timeline for Family b.49.2.3: Eukaryotic ODC-like: