SCOPe 2.04: Protein: CD1, alpha-3 domain

Lineage for Protein: CD1, alpha-3 domain

Root: SCOPe 2.04
Class b: All beta proteins [48724] (176 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.1: Immunoglobulin [48726] (5 families)
Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
Protein CD1, alpha-3 domain [88615] (5 species)

Species:

Cow (Bos taurus) [TaxId:9913] [226527] (2 PDB entries)
1. Domains for 4f7c:
  1. Domain d4f7ca2: 4f7c A:184-279 [202012]
    Other proteins in same PDB: d4f7ca1, d4f7cb_, d4f7cc1, d4f7cd_
    automated match to d1gzqa1
    complexed with 0sg
  2. Domain d4f7cc2: 4f7c C:184-279 [202014]
    Other proteins in same PDB: d4f7ca1, d4f7cb_, d4f7cc1, d4f7cd_
    automated match to d1gzqa1
    complexed with 0sg
2. Domain for 4f7e:
  - Domain d4f7ea2: 4f7e A:184-278 [202016]
    Other proteins in same PDB: d4f7ea1, d4f7eb_
    automated match to d1gzqa1
    complexed with 0sh, nag, so4

Human (Homo sapiens), CD1a [TaxId:9606] [101513] (5 PDB entries)

Domains for 1onq:
1. Domain d1onqa1: 1onq A:184-280 [93365]
  Other proteins in same PDB: d1onqa2, d1onqb_, d1onqc2, d1onqd_
  complexed with fuc, nag, slf
2. Domain d1onqc1: 1onq C:184-279 [93368]
  Other proteins in same PDB: d1onqa2, d1onqb_, d1onqc2, d1onqd_
  complexed with fuc, nag, slf

Domains for 3huj:

Domain d3huja2: 3huj A:184-280 [199525]
Other proteins in same PDB: d3huja1, d3hujb_, d3hujc1, d3hujd_, d3huje1, d3huje2, d3hujf1, d3hujf2, d3hujg1, d3hujg2, d3hujh1, d3hujh2
automated match to d1onqa1
complexed with agh, mg, nag, ndg

Domain d3hujc2: 3huj C:184-278 [199527]
Other proteins in same PDB: d3huja1, d3hujb_, d3hujc1, d3hujd_, d3huje1, d3huje2, d3hujf1, d3hujf2, d3hujg1, d3hujg2, d3hujh1, d3hujh2
automated match to d1onqa1
complexed with agh, mg, nag, ndg

Domains for 3u0p:
1. Domain d3u0pa2: 3u0p A:184-278 [200911]
  Other proteins in same PDB: d3u0pa1, d3u0pb_, d3u0pc1, d3u0pd_, d3u0pe1, d3u0pf_
  automated match to d1onqa1
  complexed with gol, hex, lsc, nbu, so4, und
2. Domain d3u0pc2: 3u0p C:184-279 [200913]
  Other proteins in same PDB: d3u0pa1, d3u0pb_, d3u0pc1, d3u0pd_, d3u0pe1, d3u0pf_
  automated match to d1onqa1
  complexed with gol, hex, lsc, nbu, so4, und
3. Domain d3u0pe2: 3u0p E:184-277 [200916]
  Other proteins in same PDB: d3u0pa1, d3u0pb_, d3u0pc1, d3u0pd_, d3u0pe1, d3u0pf_
  automated match to d1onqa1
  complexed with gol, hex, lsc, nbu, so4, und
Domain for 3vwk:
- Domain d3vwka2: 3vwk A:184-277 [218126]
  Other proteins in same PDB: d3vwka1, d3vwkb_, d3vwkc1, d3vwkc2, d3vwkd1, d3vwkd2
  automated match to d1onqa1
  complexed with 4gh, mg, nag
Domain for 4en3:
- Domain d4en3c2: 4en3 C:184-277 [201883]
  Other proteins in same PDB: d4en3a1, d4en3a2, d4en3b1, d4en3b2, d4en3c1, d4en3d_
  automated match to d1onqa1
  complexed with agh, fuc, gol, nag

Human (Homo sapiens), CD1b [TaxId:9606] [88617] (6 PDB entries)
1. Domain for 1gzp:
  - Domain d1gzpa1: 1gzp A:184-280 [70815]
    Other proteins in same PDB: d1gzpa2, d1gzpb_
    complexed with d12, gm2, twt
2. Domain for 1gzq:
  - Domain d1gzqa1: 1gzq A:184-280 [70818]
    Other proteins in same PDB: d1gzqa2, d1gzqb_
    complexed with d12, no3, pii, twt
3. Domain for 1uqs:
  - Domain d1uqsa1: 1uqs A:184-283 [99791]
    Other proteins in same PDB: d1uqsa2, d1uqsb_
    complexed with gmm
4. Domains for 1xz0:
  1. Domain d1xz0a1: 1xz0 A:184-277 [122461]
    Other proteins in same PDB: d1xz0a2, d1xz0b_, d1xz0c2, d1xz0d_
    automated match to d1gzqa1
    complexed with jh0
  2. Domain d1xz0c1: 1xz0 C:184-277 [122464]
    Other proteins in same PDB: d1xz0a2, d1xz0b_, d1xz0c2, d1xz0d_
    automated match to d1gzqa1
    complexed with jh0
5. Domain for 2h26:
  - Domain d2h26a1: 2h26 A:184-905 [135990]
    Other proteins in same PDB: d2h26a2, d2h26b_
    automated match to d3t8xc2
    complexed with 6pl, 6ul, gol, so4
6. Domains for 3t8x:
  1. Domain d3t8xa2: 3t8x A:184-278 [200775]
    Other proteins in same PDB: d3t8xa1, d3t8xb_, d3t8xc1, d3t8xd_
    automated match to d1gzqa1
    complexed with act, gol, so4, t8x, uli
  2. Domain d3t8xc2: 3t8x C:184-282 [200777]
    Other proteins in same PDB: d3t8xa1, d3t8xb_, d3t8xc1, d3t8xd_
    automated match to d1gzqa1
    complexed with act, gol, so4, t8x, uli
Human (Homo sapiens), CD1d [TaxId:9606] [158876] (2 PDB entries)
Uniprot P15813 202-295
1. Domain for 1zt4:
  - Domain d1zt4a1: 1zt4 A:184-277 [144763]
    Other proteins in same PDB: d1zt4a2, d1zt4b_, d1zt4c1, d1zt4c2, d1zt4d_
    complexed with agh
2. Domains for 2po6:
  1. Domain d2po6a1: 2po6 A:184-277 [149710]
    Other proteins in same PDB: d2po6a2, d2po6b1, d2po6e2, d2po6f1
    automatically matched to 1ZT4 A:184-277
    complexed with agh, nag
  2. Domain d2po6e1: 2po6 E:184-277 [149713]
    Other proteins in same PDB: d2po6a2, d2po6b1, d2po6e2, d2po6f1
    automatically matched to 1ZT4 A:184-277
    complexed with agh, nag
Mouse (Mus musculus) [TaxId:10090] [88616] (9 PDB entries)
1. Domains for 1cd1:
  1. Domain d1cd1a1: 1cd1 A:186-279 [21579]
    Other proteins in same PDB: d1cd1a2, d1cd1b_, d1cd1c2, d1cd1d_
  2. Domain d1cd1c1: 1cd1 C:186-279 [21581]
    Other proteins in same PDB: d1cd1a2, d1cd1b_, d1cd1c2, d1cd1d_
2. Domains for 2akr:
  1. Domain d2akra1: 2akr A:186-279 [126931]
    Other proteins in same PDB: d2akra2, d2akrb_, d2akrc2, d2akrd_
    automated match to d1onqa1
    complexed with cis, nag
  2. Domain d2akrc1: 2akr C:186-279 [126934]
    Other proteins in same PDB: d2akra2, d2akrb_, d2akrc2, d2akrd_
    automated match to d1onqa1
    complexed with cis, nag
3. Domain for 2gaz:
  - Domain d2gaza1: 2gaz A:186-279 [134896]
    Other proteins in same PDB: d2gaza2, d2gazb_
    automated match to d1onqa1
    complexed with nag, xpx
4. Domains for 2q7y:
  1. Domain d2q7ya1: 2q7y A:186-279 [150106]
    Other proteins in same PDB: d2q7ya2, d2q7yb_, d2q7yc2, d2q7yd_
    automated match to d1onqa1
    complexed with igc, nag, plm
  2. Domain d2q7yc1: 2q7y C:186-279 [150109]
    Other proteins in same PDB: d2q7ya2, d2q7yb_, d2q7yc2, d2q7yd_
    automated match to d1onqa1
    complexed with igc, nag, plm
5. Domain for 3arb:
  - Domain d3arba2: 3arb A:186-302 [231814]
    Other proteins in same PDB: d3arba1, d3arbb_, d3arbc1, d3arbc2, d3arbd1, d3arbd2
    automated match to d3area2
    complexed with d12, fee, nag, peg
6. Domain for 3are:
  - Domain d3area2: 3are A:186-300 [198913]
    Other proteins in same PDB: d3area1, d3areb_, d3arec1, d3arec2, d3ared1, d3ared2
    automated match to d1gzqa1
    complexed with 4gh, nag, peg
7. Domain for 3arf:
  - Domain d3arfa2: 3arf A:186-300 [198919]
    Other proteins in same PDB: d3arfa1, d3arfb_, d3arfc1, d3arfc2, d3arfd1, d3arfd2
    automated match to d1gzqa1
    complexed with db3
8. Domain for 3qi9:
  - Domain d3qi9a2: 3qi9 A:186-295 [200347]
    Other proteins in same PDB: d3qi9a1, d3qi9b_, d3qi9c1, d3qi9c2, d3qi9d1, d3qi9d2
    automated match to d1gzqa1
    complexed with gol, mg, nag, pii
9. Domain for 3scm:
  - Domain d3scma2: 3scm A:186-295 [200607]
    Other proteins in same PDB: d3scma1, d3scmb_, d3scmc1, d3scmc2, d3scmd1, d3scmd2
    automated match to d1gzqa1
    complexed with lgn, nag

More info for Protein CD1, alpha-3 domain from b.1.1.2: C1 set domains (antibody constant domain-like)

Timeline for Protein CD1, alpha-3 domain from b.1.1.2: C1 set domains (antibody constant domain-like):

Protein CD1, alpha-3 domain from b.1.1.2: C1 set domains (antibody constant domain-like) first appeared in SCOP 1.65
Protein CD1, alpha-3 domain from b.1.1.2: C1 set domains (antibody constant domain-like) appears in SCOPe 2.03
Protein CD1, alpha-3 domain from b.1.1.2: C1 set domains (antibody constant domain-like) appears in SCOPe 2.05
Protein CD1, alpha-3 domain from b.1.1.2: C1 set domains (antibody constant domain-like) appears in the current release, SCOPe 2.08