Lineage for Species: Mouse (Mus musculus) [TaxId: 10090]

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 653767Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
    VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family
  7. 653854Species Mouse (Mus musculus) [TaxId:10090] [88541] (33 PDB entries)

PDB entries in Species: Mouse (Mus musculus) [TaxId: 10090]:

  1. Domain(s) for 1a6u:
  2. Domain(s) for 1a6v:
    1. 653871Domain d1a6vl_: 1a6v L: [20256]
      Other proteins in same PDB: d1a6vh_, d1a6vi_, d1a6vj_
    2. 653872Domain d1a6vm_: 1a6v M: [20258]
      Other proteins in same PDB: d1a6vh_, d1a6vi_, d1a6vj_
    3. 653873Domain d1a6vn_: 1a6v N: [20260]
      Other proteins in same PDB: d1a6vh_, d1a6vi_, d1a6vj_
      part of Fv B1-8
      complexed with npc
  3. Domain(s) for 1a6w:
  4. Domain(s) for 1dl7:
    • 653886Domain d1dl7l_: 1dl7 L: [20498]
      Other proteins in same PDB: d1dl7h_
      part of Fv M3C65; conflict: annotated in PDB as human protein
      complexed with nch
  5. Domain(s) for 1etz:
    1. 653880Domain d1etza1: 1etz A:1-110 [20480]
      Other proteins in same PDB: d1etza2, d1etzb1, d1etzb2, d1etzh1, d1etzh2, d1etzl2
      part of anti-sweetener Fab NC10.14
      complexed with gas
    2. 653881Domain d1etzl1: 1etz L:1-110 [20478]
      Other proteins in same PDB: d1etza2, d1etzb1, d1etzb2, d1etzh1, d1etzh2, d1etzl2
  6. Domain(s) for 1f4w:
  7. Domain(s) for 1f4x:
  8. Domain(s) for 1f4y:
  9. Domain(s) for 1gig:
  10. Domain(s) for 1ind:
  11. Domain(s) for 1ine:
  12. Domain(s) for 1jn6:
  13. Domain(s) for 1jnh:
    1. 653887Domain d1jnha1: 1jnh A:1-108 [66939]
      Other proteins in same PDB: d1jnha2, d1jnhb1, d1jnhb2, d1jnhc2, d1jnhd1, d1jnhd2, d1jnhe2, d1jnhf1, d1jnhf2, d1jnhg2, d1jnhh1, d1jnhh2
    2. 653888Domain d1jnhc1: 1jnh C:1-108 [66943]
      Other proteins in same PDB: d1jnha2, d1jnhb1, d1jnhb2, d1jnhc2, d1jnhd1, d1jnhd2, d1jnhe2, d1jnhf1, d1jnhf2, d1jnhg2, d1jnhh1, d1jnhh2
    3. 653889Domain d1jnhe1: 1jnh E:1-108 [66947]
      Other proteins in same PDB: d1jnha2, d1jnhb1, d1jnhb2, d1jnhc2, d1jnhd1, d1jnhd2, d1jnhe2, d1jnhf1, d1jnhf2, d1jnhg2, d1jnhh1, d1jnhh2
    4. 653890Domain d1jnhg1: 1jnh G:1-108 [66951]
      Other proteins in same PDB: d1jnha2, d1jnhb1, d1jnhb2, d1jnhc2, d1jnhd1, d1jnhd2, d1jnhe2, d1jnhf1, d1jnhf2, d1jnhg2, d1jnhh1, d1jnhh2
      part of anti-estradiol Fab 10G6D6
      complexed with eco
  14. Domain(s) for 1mfa:
  15. Domain(s) for 1mfb:
  16. Domain(s) for 1mfc:
  17. Domain(s) for 1mfd:
  18. Domain(s) for 1mfe:
  19. Domain(s) for 1nc2:
    1. 653865Domain d1nc2a1: 1nc2 A:1-110 [91781]
      Other proteins in same PDB: d1nc2a2, d1nc2b1, d1nc2b2, d1nc2c2, d1nc2d1, d1nc2d2
    2. 653866Domain d1nc2c1: 1nc2 C:1-110 [91785]
      Other proteins in same PDB: d1nc2a2, d1nc2b1, d1nc2b2, d1nc2c2, d1nc2d1, d1nc2d2
      part of Fab 2d12.5
      complexed with cl, doe, nag, yt3
  20. Domain(s) for 1nc4:
    1. 653868Domain d1nc4a1: 1nc4 A:1-110 [91789]
      Other proteins in same PDB: d1nc4a2, d1nc4b1, d1nc4b2, d1nc4c2, d1nc4d1, d1nc4d2
    2. 653869Domain d1nc4c1: 1nc4 C:1-110 [91793]
      Other proteins in same PDB: d1nc4a2, d1nc4b1, d1nc4b2, d1nc4c2, d1nc4d1, d1nc4d2
      part of Fab 2d12.5
      complexed with cl, dof, gd3, nag
  21. Domain(s) for 1ngp:
  22. Domain(s) for 1ngq:
  23. Domain(s) for 1nj9:
    1. 653883Domain d1nj9a1: 1nj9 A:1-108 [91897]
      Other proteins in same PDB: d1nj9a2, d1nj9b1, d1nj9b2, d1nj9h1, d1nj9h2, d1nj9l2
    2. 653884Domain d1nj9l1: 1nj9 L:1-108 [91903]
      Other proteins in same PDB: d1nj9a2, d1nj9b1, d1nj9b2, d1nj9h1, d1nj9h2, d1nj9l2
      part of cocaine hydrolytic Fab 15a10
      complexed with na
  24. Domain(s) for 1p4b:
  25. Domain(s) for 1p4i:
  26. Domain(s) for 1pg7:
    1. 653878Domain d1pg7w1: 1pg7 W:1-108 [94682]
      Other proteins in same PDB: d1pg7h1, d1pg7h2, d1pg7i1, d1pg7i2, d1pg7l1, d1pg7l2, d1pg7m1, d1pg7m2, d1pg7w2, d1pg7x1, d1pg7x2, d1pg7y2, d1pg7z1, d1pg7z2
    2. 653879Domain d1pg7y1: 1pg7 Y:1-108 [94686]
      Other proteins in same PDB: d1pg7h1, d1pg7h2, d1pg7i1, d1pg7i2, d1pg7l1, d1pg7l2, d1pg7m1, d1pg7m2, d1pg7w2, d1pg7x1, d1pg7x2, d1pg7y2, d1pg7z1, d1pg7z2
      part of Fab 6A6
  27. Domain(s) for 1q0x:
  28. Domain(s) for 1q0y:
  29. Domain(s) for 1sm3:
  30. Domain(s) for 1yuh:
    1. 653897Domain d1yuha1: 1yuh A:2-109 [20098]
      Other proteins in same PDB: d1yuha2, d1yuhb1, d1yuhb2, d1yuhh1, d1yuhh2, d1yuhl2
      part of an anti-nitrophenol Fab
      complexed with np
    2. 653898Domain d1yuhl1: 1yuh L:2-109 [20096]
      Other proteins in same PDB: d1yuha2, d1yuhb1, d1yuhb2, d1yuhh1, d1yuhh2, d1yuhl2
  31. Domain(s) for 2vir:
  32. Domain(s) for 2vis:
  33. Domain(s) for 2vit:

More info for Species Mouse (Mus musculus) [TaxId:10090] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda

Timeline for Species Mouse (Mus musculus) [TaxId:10090] from b.1.1.1 Immunoglobulin light chain lambda variable domain, VL-lambda: