Lineage for Species: Human (Homo sapiens), cluster 3.2

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 362615Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 362616Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 362617Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (24 proteins)
  6. 363425Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 363541Species Human (Homo sapiens), cluster 3.2 [TaxId:9606] [88523] (7 PDB entries)

PDB entries in Species: Human (Homo sapiens), cluster 3.2:

  1. Domain(s) for 1g9m:
  2. Domain(s) for 1g9n:
  3. Domain(s) for 1gc1:
  4. Domain(s) for 1rhh:
    1. 363542Domain d1rhha1: 1rhh A:1-106A [97473]
      Other proteins in same PDB: d1rhha2, d1rhhb1, d1rhhb2, d1rhhc2, d1rhhd1, d1rhhd2
    2. 363543Domain d1rhhc1: 1rhh C:1-106A [97477]
      Other proteins in same PDB: d1rhha2, d1rhhb1, d1rhhb2, d1rhhc2, d1rhhd1, d1rhhd2
      part of HIV-1 neutralizing Fab x5
  5. Domain(s) for 1rz8:
    1. 363544Domain d1rz8a1: 1rz8 A:1-109 [98137]
      Other proteins in same PDB: d1rz8a2, d1rz8b1, d1rz8b2, d1rz8c2, d1rz8d1, d1rz8d2
    2. 363545Domain d1rz8c1: 1rz8 C:1-109 [98141]
      Other proteins in same PDB: d1rz8a2, d1rz8b1, d1rz8b2, d1rz8c2, d1rz8d1, d1rz8d2
      part of anti HIV-1 gp120 Fab 17B
  6. Domain(s) for 1rzj:
  7. Domain(s) for 1rzk:

More info for Species Human (Homo sapiens), cluster 3.2 [TaxId:9606] from b.1.1.1 Immunoglobulin light chain kappa variable domain, VL-kappa

Timeline for Species Human (Homo sapiens), cluster 3.2 [TaxId:9606] from b.1.1.1 Immunoglobulin light chain kappa variable domain, VL-kappa: