Lineage for Species: Human (Homo sapiens), cluster 2 [TaxId: 9606]

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 929299Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 929300Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 929301Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 930396Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 930521Species Human (Homo sapiens), cluster 2 [TaxId:9606] [88521] (10 PDB entries)

PDB entries in Species: Human (Homo sapiens), cluster 2 [TaxId: 9606]:

  1. Domain(s) for 1eeq:
    1. 930522Domain d1eeqa_: 1eeq A: [20544]
      VL dimer of Bence-Jones protein LEN
      mutant
    2. 930523Domain d1eeqb_: 1eeq B: [20545]
      VL dimer of Bence-Jones protein LEN
      mutant
  2. Domain(s) for 1eeu:
    1. 930524Domain d1eeua_: 1eeu A: [20546]
      VL dimer of Bence-Jones protein LEN
      complexed with ipa; mutant
    2. 930525Domain d1eeub_: 1eeu B: [20547]
      VL dimer of Bence-Jones protein LEN
      complexed with ipa; mutant
  3. Domain(s) for 1efq:
    • 930526Domain d1efqa_: 1efq A: [20548]
      VL dimer of Bence-Jones protein LEN
      complexed with ium, zn; mutant
  4. Domain(s) for 1ek3:
    1. 930529Domain d1ek3a_: 1ek3 A: [59434]
      VL dimer of Bence-Jones protein REC
      complexed with ca, cl
    2. 930530Domain d1ek3b_: 1ek3 B: [59435]
      VL dimer of Bence-Jones protein REC
      complexed with ca, cl
  5. Domain(s) for 1lve:
  6. Domain(s) for 1qac:
    1. 930527Domain d1qaca_: 1qac A: [20549]
      VL dimer of Bence-Jones protein LEN
    2. 930528Domain d1qacb_: 1qac B: [20550]
      VL dimer of Bence-Jones protein LEN
  7. Domain(s) for 2lve:
  8. Domain(s) for 3lve:
    • 930531Domain d3lvea_: 3lve A: [20552]
      VL dimer of Bence-Jones protein LEN
      complexed with zn; mutant
  9. Domain(s) for 4lve:
    1. 930534Domain d4lvea_: 4lve A: [20554]
      VL dimer of Bence-Jones protein LEN
      mutant
    2. 930535Domain d4lveb_: 4lve B: [20555]
      VL dimer of Bence-Jones protein LEN
      mutant
  10. Domain(s) for 5lve:
    • 930533Domain d5lvea_: 5lve A: [20551]
      VL dimer of Bence-Jones protein LEN
      complexed with zn

More info for Species Human (Homo sapiens), cluster 2 [TaxId:9606] from b.1.1.1 Immunoglobulin light chain kappa variable domain, VL-kappa

Timeline for Species Human (Homo sapiens), cluster 2 [TaxId:9606] from b.1.1.1 Immunoglobulin light chain kappa variable domain, VL-kappa: