SCOPe 2.05: Domain d1ubea1: 1ube A:5-270

Lineage for d1ubea1 (1ube A:5-270)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (18 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein RecA protein, ATPase-domain [52671] (6 species)
   C-terminal domain is alpha+beta

7. Species Mycobacterium smegmatis [TaxId:1772] [89675] (4 PDB entries)

8. Domain d1ubea1: 1ube A:5-270 [88412]
   Other proteins in same PDB: d1ubea2
   protein/DNA complex; complexed with adp

Details for d1ubea1

PDB Entry: 1ube, 3.3 Å

PDB Description: MsRecA-ADP Complex

PDB Compounds: (A:) RecA

SCOPe Domain Sequences for d1ubea1:

Sequence, based on SEQRES records:

>d1ubea1 c.37.1.11 (A:5-270) RecA protein, ATPase-domain {Mycobacterium smegmatis [TaxId: 1772]}
apdrekalelamaqidknfgkgsvmrlgeevrqpisviptgsisldvalgigglprgrvi
eiygpessgkttvalhavanaqaaggiaafidaehaldpeyakklgvdtdsllvsqpdtg
eqaleiadmlvrsgaldiividsvaalvpraeiegemgdshvglqarlmsqalrkmtgal
nnsgttaifinqlrekigvmfgspetttggkalkfyasvrldvrrietlkdgtdavgnrt
rvkvvknkvsppfkqaefdilygqgi

Sequence, based on observed residues (ATOM records):

>d1ubea1 c.37.1.11 (A:5-270) RecA protein, ATPase-domain {Mycobacterium smegmatis [TaxId: 1772]}
apdrekalelamaqidknfgkgsvmrlgeevrqpisviptgsisldvalgigglprgrvi
eiygpessgkttvalhavanaqaaggiaafidaehaldpeyakklgvdtdsllvsqpdtg
eqaleiadmlvrsgaldiividsvaalvpraeieglqarlmsqalrkmtgalnnsgttai
finqtggkalkfyasvrldvrrietlkdgtdavgnrtrvkvvknkvsppfkqaefdilyg
qgi

Timeline for d1ubea1:

• d1ubea1 first appeared in SCOP 1.65
  
• d1ubea1 appears in SCOPe 2.04
  
• d1ubea1 appears in SCOPe 2.06
  
• d1ubea1 appears in the current release, SCOPe 2.08