SCOPe 2.06: Domain d1p16b1: 1p16 B:246-389

Lineage for d1p16b1 (1p16 B:246-389)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.40: OB-fold [50198] (16 superfamilies)
   barrel, closed or partly opened n=5, S=10 or S=8; greek-key

4. Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families)

5. Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain [50307] (5 proteins)

6. Protein mRNA capping enzyme alpha subunit [89330] (1 species)

7. Species Yeast (Candida albicans) [TaxId:5476] [89331] (1 PDB entry)

8. Domain d1p16b1: 1p16 B:246-389 [87663]
   Other proteins in same PDB: d1p16a2, d1p16a3, d1p16b2, d1p16b3
   complexed with the phosphorylated carboxyl-terminal peptide of RNA polymerase II, chains C and D
   complexed with g, gtp, po4

Details for d1p16b1

PDB Entry: 1p16, 2.7 Å

PDB Description: structure of an mrna capping enzyme bound to the phosphorylated carboxyl-terminal domain of rna polymerase ii

PDB Compounds: (B:) mRNA capping enzyme alpha subunit

SCOPe Domain Sequences for d1p16b1:

Sequence, based on SEQRES records:

>d1p16b1 b.40.4.6 (B:246-389) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]}
eentvdfqlefvfnevqdpdlderdptstyldydakpnliklrvwqgsnvhtdfakldls
dddwerlkaleqplqgriaecrqsttkkgywemlrfrndksngnhisvvekilvsikdgv
kekeviewcpkisrawkkrendrr

Sequence, based on observed residues (ATOM records):

>d1p16b1 b.40.4.6 (B:246-389) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]}
eentvdfqlefvfnevqyldydakpnliklrvwqgsnvhtdfakldlsdddwerlkaleq
plqgriaecrqsttkkgywemlrfrndksngnhisvvekilvsikdgvkekeviewcpki
srawkkrendrr

Timeline for d1p16b1:

• d1p16b1 first appeared in SCOP 1.65
  
• d1p16b1 appears in SCOPe 2.05
  
• d1p16b1 appears in SCOPe 2.07
  
• d1p16b1 appears in the current release, SCOPe 2.08