Lineage for d1orqa1 (1orq A:1-108)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2352459Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2352460Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2352461Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2353665Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2354171Species Mouse (Mus musculus), cluster 3.1 [TaxId:10090] [88527] (13 PDB entries)
  8. 2354182Domain d1orqa1: 1orq A:1-108 [87344]
    Other proteins in same PDB: d1orqa2, d1orqb1, d1orqb2, d1orqc_
    part of anti-VD potassium channel KVAP Fab 6E1
    complexed with cd, k

Details for d1orqa1

PDB Entry: 1orq (more details), 3.2 Å

PDB Description: x-ray structure of a voltage-dependent potassium channel in complex with an fab
PDB Compounds: (A:) 6E1 Fab light chain

SCOPe Domain Sequences for d1orqa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1orqa1 b.1.1.1 (A:1-108) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]}

SCOPe Domain Coordinates for d1orqa1:

Click to download the PDB-style file with coordinates for d1orqa1.
(The format of our PDB-style files is described here.)

Timeline for d1orqa1: