Lineage for d1nuda4 (1nud A:141-460)

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 851268Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 851269Superfamily d.3.1: Cysteine proteinases [54001] (22 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 851591Family d.3.1.4: Transglutaminase core [54044] (2 proteins)
  6. 851599Protein Transglutaminase catalytic domain [54045] (4 species)
  7. 851617Species Human (Homo sapiens), TGase E3 [TaxId:9606] [75334] (8 PDB entries)
  8. 851631Domain d1nuda4: 1nud A:141-460 [86177]
    Other proteins in same PDB: d1nuda1, d1nuda2, d1nuda3, d1nudb1, d1nudb2, d1nudb3

Details for d1nuda4

PDB Entry: 1nud (more details), 2.7 Å

PDB Description: role of calcium ions in the activation and activity of the transglutaminase 3 enzyme (3 calciums, active form)
PDB Compounds: (A:) Protein-glutamine glutamyltransferase E

SCOP Domain Sequences for d1nuda4:

Sequence; same for both SEQRES and ATOM records: (download)

>d1nuda4 d.3.1.4 (A:141-460) Transglutaminase catalytic domain {Human (Homo sapiens), TGase E3 [TaxId: 9606]}
dsvfmgnhaereeyvqedagiifvgstnrigmigwnfgqfeedilsiclsildrslnfrr
daatdvasrndpkyvgrvlsaminsnddngvlagnwsgtytggrdprswdgsveilknwk
ksglspvrygqcwvfagtlntalrslgipsrvitnfnsahdtdrnlsvdvyydpmgnpld
kgsdsvwnfhvwnegwfvrsdlgpsyggwqvldatpqersqgvfqcgpasvigvregdvq
lnfdmpfifaevnadritwlydnttgkqwknsvnshtigryistkavgsnarmdvtdkyk
ypegsdqerqvfqkalgklk

SCOP Domain Coordinates for d1nuda4:

Click to download the PDB-style file with coordinates for d1nuda4.
(The format of our PDB-style files is described here.)

Timeline for d1nuda4: