Lineage for d1nr1b1 (1nr1 B:213-505)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2845190Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (12 proteins)
    extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site
  6. 2845191Protein Glutamate dehydrogenase [51884] (8 species)
  7. 2845245Species Human (Homo sapiens) [TaxId:9606] [75115] (2 PDB entries)
  8. 2845253Domain d1nr1b1: 1nr1 B:213-505 [86082]
    Other proteins in same PDB: d1nr1a2, d1nr1b2, d1nr1c2, d1nr1d2, d1nr1e2, d1nr1f2
    mutant
    has additional insertions and/or extensions that are not grouped together

Details for d1nr1b1

PDB Entry: 1nr1 (more details), 3.3 Å

PDB Description: crystal structure of the r463a mutant of human glutamate dehydrogenase
PDB Compounds: (B:) Glutamate Dehydrogenase 1

SCOPe Domain Sequences for d1nr1b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1nr1b1 c.2.1.7 (B:213-505) Glutamate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
hgrisatgrgvfhgienfineasymsilgmtpgfgdktfvvqgfgnvglhsmrylhrfga
kciavgesdgsiwnpdgidpkeledfklqhgsilgfpkakpyegsileadcdilipaase
kqltksnaprvkakiiaegangpttpeadkiflernimvipdlylnaggvtvsyfewlkn
lnhvsygrltfkyerdsnyhllmsvqeslerkfgkhggtipivptaefqdrisgasekdi
vhsglaytmeasarqimrtamkynlgldlrtaayvnaiekvfkvyneagvtft

SCOPe Domain Coordinates for d1nr1b1:

Click to download the PDB-style file with coordinates for d1nr1b1.
(The format of our PDB-style files is described here.)

Timeline for d1nr1b1: