Lineage for d1ms5b2 (1ms5 B:2-399)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2807606Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
    consists of six 4-stranded beta-sheet motifs; meander
  4. 2807607Superfamily b.68.1: Sialidases [50939] (3 families) (S)
  5. 2807608Family b.68.1.1: Sialidases (neuraminidases) [50940] (10 proteins)
  6. 2807920Protein Trypanosoma sialidase [82164] (2 species)
  7. 2807921Species Trypanosoma cruzi [TaxId:5693] [89371] (13 PDB entries)
    Uniprot Q26966
  8. 2807932Domain d1ms5b2: 1ms5 B:2-399 [85079]
    Other proteins in same PDB: d1ms5a1, d1ms5b1

Details for d1ms5b2

PDB Entry: 1ms5 (more details), 2 Å

PDB Description: triclinic form of trypanosoma cruzi trans-sialidase, soaked with n- acetylneuraminyl-a-2,3-thio-galactoside (na-s-gal)
PDB Compounds: (B:) Trans-sialidase

SCOPe Domain Sequences for d1ms5b2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ms5b2 b.68.1.1 (B:2-399) Trypanosoma sialidase {Trypanosoma cruzi [TaxId: 5693]}
apgssrvelfkrqsskvpfekdgkvtervvhsfrlpalvnvdgvmvaiadaryetsfdns
lidtvakysvddgetwetqiaiknsrassvsrvvdptvivkgnklyvlvgsynssrsywt
shgdardwdillavgevtkstaggkitasikwgspvslkeffpaemegmhtnqflggagv
aivasngnlvypvqvtnkkkqvfskifysedegktwkfgkgrsafgcsepvalewegkli
intrvdyrrrlvyessdmgntwleavgtlsrvwgpspksnqpgsqssftavtiegmrvml
fthplnfkgrwlrdrlnlwltdnqriynvgqvsigdensayssvlykddklyclheinsn
evyslvfarlvgelriiksvlqswknwdshlssictpa

SCOPe Domain Coordinates for d1ms5b2:

Click to download the PDB-style file with coordinates for d1ms5b2.
(The format of our PDB-style files is described here.)

Timeline for d1ms5b2:

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Domains from same chain:
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d1ms5b1