Lineage for d1ms5a1 (1ms5 A:409-633)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 663169Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 663170Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (25 families) (S)
  5. 664233Family b.29.1.15: Trypanosoma sialidase, C-terminal domain [82038] (1 protein)
  6. 664234Protein Trypanosoma sialidase, C-terminal domain [82039] (2 species)
  7. 664235Species Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId:5693] [89271] (11 PDB entries)
  8. 664247Domain d1ms5a1: 1ms5 A:409-633 [85076]
    Other proteins in same PDB: d1ms5a2, d1ms5b2

Details for d1ms5a1

PDB Entry: 1ms5 (more details), 2 Å

PDB Description: Triclinic form of Trypanosoma cruzi trans-sialidase, soaked with N-acetylneuraminyl-a-2,3-thio-galactoside (NA-S-Gal)
PDB Compounds: (A:) Trans-sialidase

SCOP Domain Sequences for d1ms5a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ms5a1 b.29.1.15 (A:409-633) Trypanosoma sialidase, C-terminal domain {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]}
gcgpavttvglvgflshsatktewedayrcvnastanaervpnglkfagvgggalwpvsq
qgqnqryffanhaftlvasvtihevpkgaspllgasldssggkkllglsydkrhqwqpiy
gstpvtptgswemgkryhvvltmankigsvyidgeplegsgqtvvpdertpdishfyvgg
ykrsgmptdsrvtvnnvllynrqlnaeeirtlflsqdligteahm

SCOP Domain Coordinates for d1ms5a1:

Click to download the PDB-style file with coordinates for d1ms5a1.
(The format of our PDB-style files is described here.)

Timeline for d1ms5a1:

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Domains from same chain:
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d1ms5a2