SCOPe 2.04: Domain d1lgva1: 1lgv A:1-112

Lineage for d1lgva1 (1lgv A:1-112)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)

6. Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
   VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family

7. Species Human (Homo sapiens), cluster 4 [TaxId:9606] [88539] (23 PDB entries)

8. Domain d1lgva1: 1lgv A:1-112 [84608]
   Other proteins in same PDB: d1lgva2, d1lgvb2
   part of amyloidogenic protein BUR

Details for d1lgva1

PDB Entry: 1lgv, 1.95 Å

PDB Description: structure of a human bence-jones dimer crystallized in u.s. space shuttle mission sts-95: 100k

PDB Compounds: (A:) immunoglobulin lambda light chain

SCOPe Domain Sequences for d1lgva1:

Sequence; same for both SEQRES and ATOM records:

>d1lgva1 b.1.1.1 (A:1-112) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 4 [TaxId: 9606]}
etaltqpasvsgspgqsitvsctgvssivgsynlvswyqqhpgkapklltyevnkrpsgv
sdrfsgsksgnsasltisglqaedeadyycssydgsstsvvfgggtkltvlg

Timeline for d1lgva1:

• d1lgva1 first appeared in SCOP 1.65
  
• d1lgva1 appears in SCOPe 2.03
  
• d1lgva1 appears in SCOPe 2.05
  
• d1lgva1 appears in the current release, SCOPe 2.08