Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) |
Family c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4 proteins) Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain |
Protein alpha-D-glucuronidase catalytic domain [82254] (2 species) inverting reaction mechanism |
Species Bacillus stearothermophilus [TaxId:1422] [82256] (7 PDB entries) |
Domain d1l8na1: 1l8n A:143-678 [84564] Other proteins in same PDB: d1l8na2 complexed with gcw, gol has additional subdomain(s) that are not in the common domain |
PDB Entry: 1l8n (more details), 1.5 Å
SCOPe Domain Sequences for d1l8na1:
Sequence, based on SEQRES records: (download)
>d1l8na1 c.1.8.10 (A:143-678) alpha-D-glucuronidase catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} rlrminhwdnmdgsiergyagrsiffvddqfvkqnqrikdyarllasvginaisinnvnv hktetklitdhflpdvaevadifrtygiktflsinyaspieigglptadpldpevrwwwk etakriyqyipdfggfvvkadsefrpgpftygrdhaeganmlaealapfgglviwrcfvy ncqqdwrdrttdrakaaydhfkpldgqfrenvilqikngpmdfqvrepvsplfgampktn qmmevqitqeytgqqkhlcflipqwkevldfdtyakgkgsevkkvidgslfdyrysgiag vsnigsdpnwtghtlaqanlygfgrlawnpdlsaeeianewvvqtfgddsqvvetiswml lsswriyenytsplgvgwmvnpghhygpnvdgyeyshwgtyhyadrdgigvdrtvatgtg ytaqyfpenaamyesldtcpdelllffhhvpythrlhsgetviqhiynthfegveqakql rkrweqlkgkidekryhdvlerltiqvehakewrdvintyfyrksgiddqygrkiy
>d1l8na1 c.1.8.10 (A:143-678) alpha-D-glucuronidase catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} rlrminhwdnmdgsiergyagrsiffvddqfvnqrikdyarllasvginaisinnvnvhk tetklitdhflpdvaevadifrtygiktflsinyaspieigglptadpldpevrwwwket akriyqyipdfggfvvkadsefrpgpftygrdhaeganmlaealapfgglviwrcfvync qqdwrdrttdrakaaydhfkpldgqfrenvilqikngpmdfqvrepvsplfgampktnqm mevqitqeytgqqkhlcflipqwkevldfdtyakgkgsevkkvidgslfdyrysgiagvs nigsdpnwtghtlaqanlygfgrlawnpdlsaeeianewvvqtfgddsqvvetiswmlls swriyenytsplgvgwmvnpghhygpnvdgyeyshwgtyhyadrdgigvdrtvatgtgyt aqyfpenaamyesldtcpdelllffhhvpythrlhsgetviqhiynthfegveqakqlrk rweqlkgkidekryhdvlerltiqvehakewrdvintyfyrksgiddqygrkiy
Timeline for d1l8na1: