Lineage for d1k2db1 (1k2d B:93-190)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 654118Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)
  6. 654956Protein Class II MHC beta chain, C-terminal domain [88625] (6 species)
  7. 655024Species Mouse (Mus musculus), I-A group [TaxId:10090] [88631] (11 PDB entries)
    probably orthologous to the human HLA-DQ group
  8. 655027Domain d1k2db1: 1k2d B:93-190 [84293]
    Other proteins in same PDB: d1k2da1, d1k2da2, d1k2db2
    complexed with nag

Details for d1k2db1

PDB Entry: 1k2d (more details), 2.2 Å

PDB Description: crystal structure of the autoimmune mhc class ii i-au complexed with myelin basic protein 1-11 at 2.2a
PDB Compounds: (B:) H-2 class II histocompatibility antigen, A-U beta chain

SCOP Domain Sequences for d1k2db1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1k2db1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal domain {Mouse (Mus musculus), I-A group [TaxId: 10090]}
rleqpnvvislsrtealnhhntlvcsvtdfypakikvrwfrngqeetvgvsstqlirngd
wtfqvlvmlemtprrgevytchvehpslkspitvewra

SCOP Domain Coordinates for d1k2db1:

Click to download the PDB-style file with coordinates for d1k2db1.
(The format of our PDB-style files is described here.)

Timeline for d1k2db1:

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Domains from same chain:
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d1k2db2