Lineage for d1jwub1 (1jwu B:93-190)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 287095Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 287096Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 288543Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (22 proteins)
  6. 288980Protein Class II MHC beta chain, C-terminal domain [88625] (6 species)
  7. 288985Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88628] (23 PDB entries)
    probably orthologous to the mouse I-E group
  8. 288991Domain d1jwub1: 1jwu B:93-190 [84250]
    Other proteins in same PDB: d1jwua1, d1jwua2, d1jwub2, d1jwud1, d1jwud2
    mutant

Details for d1jwub1

PDB Entry: 1jwu (more details), 2.3 Å

PDB Description: Crystal Structure of the Complex of the MHC Class II Molecule HLA-DR1 (HA peptide 306-318) with the superantigen SEC3 Variant 3B2

SCOP Domain Sequences for d1jwub1:

Sequence, based on SEQRES records: (download)

>d1jwub1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DR group}
rrvepkvtvypsktqplqhhnllvcsvsgfypgsievrwfrngqeekagvvstgliqngd
wtfqtlvmletvprsgevytcqvehpsvtspltvewra

Sequence, based on observed residues (ATOM records): (download)

>d1jwub1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DR group}
rrvepkvtvypsktqhhnllvcsvsgfypgsievrwfrngqeekagvvstgliqngdwtf
qtlvmletvprsgevytcqvehpsvtspltvewra

SCOP Domain Coordinates for d1jwub1:

Click to download the PDB-style file with coordinates for d1jwub1.
(The format of our PDB-style files is described here.)

Timeline for d1jwub1: