Class b: All beta proteins [48724] (126 folds) |
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies |
Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (7 families) |
Family b.121.4.2: Comoviridae-like VP [88636] (2 proteins) duplication: mature coat protein consists of three similar domains that can be in a single chain or in two separate chains |
Protein Comovirus coat proteins (VP37 and VP23) [49627] (2 species) |
Species BPMV (Bean pod mottle virus) [TaxId:12260] [49628] (1 PDB entry) |
Domain d1bmv11: 1bmv 1:1001-1185 [83041] chain 1 is one-domain VP23; chain 2 is two-domain VP37 |
PDB Entry: 1bmv (more details), 3 Å
SCOP Domain Sequences for d1bmv11:
Sequence; same for both SEQRES and ATOM records: (download)
>d1bmv11 b.121.4.2 (1:1001-1185) Comovirus coat proteins (VP37 and VP23) {BPMV (Bean pod mottle virus)} sisqqtvwnqmatvrtplnfdsskqsfcqfsvdllgggisvdktgdwitlvqnspisnll rvaawkkgclmvkvvmsgnaavkrsdwaslvqvfltnsnstehfdacrwtksephsweli fpievcgpnngfemwssewanqtswhlsflvdnpkqsttfdvllgisqnfeiagntlmpa fsvpq
Timeline for d1bmv11: