SCOPe 2.08: Species: Sulfolobus shibatae [TaxId: 2286]

Lineage for Species: Sulfolobus shibatae [TaxId: 2286]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)
Family d.14.1.3: DNA gyrase/MutL, second domain [54224] (6 proteins)
Protein Topoisomerase VI-B subunit [82577] (1 species)
contains an H2TH domain inserted in front of this domain and after the N-terminal ATPase domain
Species Sulfolobus shibatae [TaxId:2286] [82578] (7 PDB entries)

PDB entries in Species: Sulfolobus shibatae [TaxId: 2286]:

Domain(s) for 1mu5:
- Domain d1mu5a2: 1mu5 A:307-470 [79473]
  Other proteins in same PDB: d1mu5a1, d1mu5a3
  complexed with ca
Domain(s) for 1mx0:
1. Domain d1mx0a2: 1mx0 A:307-467 [79619]
  Other proteins in same PDB: d1mx0a1, d1mx0a3, d1mx0b1, d1mx0b3, d1mx0c1, d1mx0c3, d1mx0d1, d1mx0d3, d1mx0e1, d1mx0e3, d1mx0f1, d1mx0f3
  complexed with anp, mg, na
2. Domain d1mx0b2: 1mx0 B:307-458 [79622]
  Other proteins in same PDB: d1mx0a1, d1mx0a3, d1mx0b1, d1mx0b3, d1mx0c1, d1mx0c3, d1mx0d1, d1mx0d3, d1mx0e1, d1mx0e3, d1mx0f1, d1mx0f3
  complexed with anp, mg, na
3. Domain d1mx0c2: 1mx0 C:307-469 [79625]
  Other proteins in same PDB: d1mx0a1, d1mx0a3, d1mx0b1, d1mx0b3, d1mx0c1, d1mx0c3, d1mx0d1, d1mx0d3, d1mx0e1, d1mx0e3, d1mx0f1, d1mx0f3
  complexed with anp, mg, na
4. Domain d1mx0d2: 1mx0 D:307-464 [79628]
  Other proteins in same PDB: d1mx0a1, d1mx0a3, d1mx0b1, d1mx0b3, d1mx0c1, d1mx0c3, d1mx0d1, d1mx0d3, d1mx0e1, d1mx0e3, d1mx0f1, d1mx0f3
  complexed with anp, mg, na
5. Domain d1mx0e2: 1mx0 E:307-461 [79631]
  Other proteins in same PDB: d1mx0a1, d1mx0a3, d1mx0b1, d1mx0b3, d1mx0c1, d1mx0c3, d1mx0d1, d1mx0d3, d1mx0e1, d1mx0e3, d1mx0f1, d1mx0f3
  complexed with anp, mg, na
6. Domain d1mx0f2: 1mx0 F:307-463 [79634]
  Other proteins in same PDB: d1mx0a1, d1mx0a3, d1mx0b1, d1mx0b3, d1mx0c1, d1mx0c3, d1mx0d1, d1mx0d3, d1mx0e1, d1mx0e3, d1mx0f1, d1mx0f3
  complexed with anp, mg, na
Domain(s) for 1z59:
- Domain d1z59a2: 1z59 A:307-470 [124456]
  Other proteins in same PDB: d1z59a1, d1z59a3
  automated match to d2hkja2
  complexed with adp, mg
Domain(s) for 1z5a:
1. Domain d1z5aa2: 1z5a A:307-469 [124459]
  Other proteins in same PDB: d1z5aa1, d1z5aa3, d1z5ab1, d1z5ab3
  automated match to d2hkja2
  complexed with adp, mg
2. Domain d1z5ab2: 1z5a B:307-463 [124462]
  Other proteins in same PDB: d1z5aa1, d1z5aa3, d1z5ab1, d1z5ab3
  automated match to d2hkja2
  complexed with adp, mg
Domain(s) for 1z5b:
1. Domain d1z5ba2: 1z5b A:307-469 [124465]
  Other proteins in same PDB: d1z5ba1, d1z5ba3, d1z5bb1, d1z5bb3
  automated match to d2hkja2
  complexed with adp, alf, mg, so4
2. Domain d1z5bb2: 1z5b B:307-463 [124468]
  Other proteins in same PDB: d1z5ba1, d1z5ba3, d1z5bb1, d1z5bb3
  automated match to d2hkja2
  complexed with adp, alf, mg, so4
Domain(s) for 1z5c:
1. Domain d1z5ca2: 1z5c A:307-469 [124471]
  Other proteins in same PDB: d1z5ca1, d1z5ca3, d1z5cb1, d1z5cb3
  automated match to d2hkja2
  complexed with adp, mg, po4
2. Domain d1z5cb2: 1z5c B:307-463 [124474]
  Other proteins in same PDB: d1z5ca1, d1z5ca3, d1z5cb1, d1z5cb3
  automated match to d2hkja2
  complexed with adp, mg, po4
Domain(s) for 2hkj:
- Domain d2hkja2: 2hkj A:307-470 [136554]
  Other proteins in same PDB: d2hkja1, d2hkja3
  automated match to d2hkja2
  complexed with dms, mg, rdc

More info for Species Sulfolobus shibatae [TaxId:2286] from d.14.1.3 Topoisomerase VI-B subunit

Timeline for Species Sulfolobus shibatae [TaxId:2286] from d.14.1.3 Topoisomerase VI-B subunit:

Species Sulfolobus shibatae [TaxId:2286] from d.14.1.3 Topoisomerase VI-B subunit first appeared in SCOP 1.63, called Species Archaeon Sulfolobus shibatae [TaxId:2286] from d.14.1.3 Topoisomerase IV-B subunit
Species Sulfolobus shibatae [TaxId:2286] from d.14.1.3 Topoisomerase VI-B subunit appears in SCOPe 2.07