SCOP 1.67: Protein: Protooncoprotein Her2 extracellular domain

Lineage for Protein: Protooncoprotein Her2 extracellular domain

Root: SCOP 1.67
Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

Superfamily c.10.2: L domain-like [52058] (8 families)
less regular structure consisting of variable repeats
Family c.10.2.5: L domain [52071] (4 proteins)
this is a repeat family; one repeat unit is 1n8z C:42-66 found in domain
Protein Protooncoprotein Her2 extracellular domain [82328] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [82329] (2 PDB entries)
1. Domains for 1n8z:
  1. Domain d1n8zc1: 1n8z C:1-165 [80322]
    Other proteins in same PDB: d1n8za1, d1n8za2, d1n8zb1, d1n8zb2, d1n8zc3, d1n8zc4
  2. Domain d1n8zc2: 1n8z C:323-488 [80323]
    Other proteins in same PDB: d1n8za1, d1n8za2, d1n8zb1, d1n8zb2, d1n8zc3, d1n8zc4
    complexed with nag, so4
2. Domains for 1s78:
  1. Domain d1s78a1: 1s78 A:1-165 [98616]
    Other proteins in same PDB: d1s78a3, d1s78a4, d1s78b3, d1s78b4, d1s78c1, d1s78c2, d1s78d1, d1s78d2, d1s78e1, d1s78e2, d1s78f1, d1s78f2
  2. Domain d1s78a2: 1s78 A:323-488 [98617]
    Other proteins in same PDB: d1s78a3, d1s78a4, d1s78b3, d1s78b4, d1s78c1, d1s78c2, d1s78d1, d1s78d2, d1s78e1, d1s78e2, d1s78f1, d1s78f2
  3. Domain d1s78b1: 1s78 B:1-165 [98620]
    Other proteins in same PDB: d1s78a3, d1s78a4, d1s78b3, d1s78b4, d1s78c1, d1s78c2, d1s78d1, d1s78d2, d1s78e1, d1s78e2, d1s78f1, d1s78f2
  4. Domain d1s78b2: 1s78 B:323-488 [98621]
    Other proteins in same PDB: d1s78a3, d1s78a4, d1s78b3, d1s78b4, d1s78c1, d1s78c2, d1s78d1, d1s78d2, d1s78e1, d1s78e2, d1s78f1, d1s78f2
    complexed with man, nag
Rat (Rattus norvegicus) [TaxId:10116] [82330] (1 PDB entry)
- Domains for 1n8y:
  1. Domain d1n8yc1: 1n8y C:1-165 [80314]
    Other proteins in same PDB: d1n8yc3, d1n8yc4
  2. Domain d1n8yc2: 1n8y C:323-488 [80315]
    Other proteins in same PDB: d1n8yc3, d1n8yc4
    complexed with nag

More info for Protein Protooncoprotein Her2 extracellular domain from c.10.2.5: L domain

Timeline for Protein Protooncoprotein Her2 extracellular domain from c.10.2.5: L domain:

Protein Protooncoprotein Her2 extracellular domain from c.10.2.5: L domain first appeared in SCOP 1.63
Protein Protooncoprotein Her2 extracellular domain from c.10.2.5: L domain appears in SCOP 1.65
Protein Protooncoprotein Her2 extracellular domain from c.10.2.5: L domain appears in SCOP 1.69
Protein Protooncoprotein Her2 extracellular domain from c.10.2.5: L domain appears in the current release, SCOPe 2.08