Lineage for Protein: alpha-D-glucuronidase catalytic domain

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2832135Family c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4 proteins)
    Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain
  6. 2832136Protein alpha-D-glucuronidase catalytic domain [82254] (2 species)
    inverting reaction mechanism

Species:

  1. 2832137Bacillus stearothermophilus [TaxId:1422] [82256] (7 PDB entries)
    1. Domain for 1k9d:
      • 2832139Domain d1k9da1: 1k9d A:143-679 [77292]
        Other proteins in same PDB: d1k9da2
        complexed with gol
        has additional subdomain(s) that are not in the common domain
    2. Domain for 1k9e:
      • 2832144Domain d1k9ea1: 1k9e A:143-679 [77294]
        Other proteins in same PDB: d1k9ea2
        complexed with gcv, gol
        has additional subdomain(s) that are not in the common domain
    3. Domain for 1k9f:
      • 2832142Domain d1k9fa1: 1k9f A:143-679 [77296]
        Other proteins in same PDB: d1k9fa2
        complexed with gol
        has additional subdomain(s) that are not in the common domain
    4. Domain for 1l8n:
      • 2832138Domain d1l8na1: 1l8n A:143-678 [84564]
        Other proteins in same PDB: d1l8na2
        complexed with gcw, gol
        has additional subdomain(s) that are not in the common domain
    5. Domain for 1mqp:
      • 2832141Domain d1mqpa1: 1mqp A:143-679 [91418]
        Other proteins in same PDB: d1mqpa2
        complexed with gol
        has additional subdomain(s) that are not in the common domain
    6. Domain for 1mqq:
      • 2832140Domain d1mqqa1: 1mqq A:143-678 [91420]
        Other proteins in same PDB: d1mqqa2
        complexed with gcu, gol
        has additional subdomain(s) that are not in the common domain
    7. Domain for 1mqr:
      • 2832143Domain d1mqra1: 1mqr A:143-679 [91422]
        Other proteins in same PDB: d1mqra2
        complexed with gol
        has additional subdomain(s) that are not in the common domain
  2. 2832145Pseudomonas cellulosa [TaxId:155077] [82255] (5 PDB entries)
    1. Domains for 1gqi:
      1. 2832146Domain d1gqia1: 1gqi A:152-712 [76279]
        Other proteins in same PDB: d1gqia2, d1gqib2
        complexed with co, edo, mg
        has additional subdomain(s) that are not in the common domain
      2. 2832147Domain d1gqib1: 1gqi B:152-712 [76281]
        Other proteins in same PDB: d1gqia2, d1gqib2
        complexed with co, edo, mg
        has additional subdomain(s) that are not in the common domain
    2. Domains for 1gqj:
      1. 2832154Domain d1gqja1: 1gqj A:152-712 [76283]
        Other proteins in same PDB: d1gqja2, d1gqjb2
        complexed with co, edo
        has additional subdomain(s) that are not in the common domain
      2. 2832155Domain d1gqjb1: 1gqj B:152-712 [76285]
        Other proteins in same PDB: d1gqja2, d1gqjb2
        complexed with co, edo
        has additional subdomain(s) that are not in the common domain
    3. Domains for 1gqk:
      1. 2832152Domain d1gqka1: 1gqk A:152-712 [76287]
        Other proteins in same PDB: d1gqka2, d1gqkb2
        complexed with bdp, co, edo
        has additional subdomain(s) that are not in the common domain
      2. 2832153Domain d1gqkb1: 1gqk B:152-712 [76289]
        Other proteins in same PDB: d1gqka2, d1gqkb2
        complexed with bdp, co, edo
        has additional subdomain(s) that are not in the common domain
    4. Domains for 1gql:
      1. 2832150Domain d1gqla1: 1gql A:152-705 [76291]
        Other proteins in same PDB: d1gqla2, d1gqlb2
        complexed with bdp, co, edo
        has additional subdomain(s) that are not in the common domain
      2. 2832151Domain d1gqlb1: 1gql B:152-704 [76293]
        Other proteins in same PDB: d1gqla2, d1gqlb2
        complexed with bdp, co, edo
        has additional subdomain(s) that are not in the common domain
    5. Domains for 1h41:
      1. 2832148Domain d1h41a1: 1h41 A:152-712 [83472]
        Other proteins in same PDB: d1h41a2, d1h41b2
        complexed with co, edo, gcv; mutant
        has additional subdomain(s) that are not in the common domain
      2. 2832149Domain d1h41b1: 1h41 B:152-712 [83474]
        Other proteins in same PDB: d1h41a2, d1h41b2
        complexed with co, edo, gcv; mutant
        has additional subdomain(s) that are not in the common domain

More info for Protein alpha-D-glucuronidase catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain

Timeline for Protein alpha-D-glucuronidase catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain: