SCOP 1.67: Species: Archaeon Pyrococcus abyssi

Lineage for Species: Archaeon Pyrococcus abyssi

Root: SCOP 1.67
Class b: All beta proteins [48724] (141 folds)
Fold b.38: Sm-like fold [50181] (2 superfamilies)
core: barrel, open; n*=4, S*=8; meander; SH3-like topology
Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (3 families)
Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (7 proteins)
forms homo and heteroheptameric ring structures
Protein Archaeal homoheptameric Sm protein [63758] (5 species)
Species Archaeon Pyrococcus abyssi [TaxId:29292] [82089] (2 PDB entries)

PDB entries in Species: Archaeon Pyrococcus abyssi:

Domain(s) for 1h64:
1. Domain d1h641_: 1h64 1: [76675]
2. Domain d1h642_: 1h64 2: [76676]
3. Domain d1h64a_: 1h64 A: [76677]
4. Domain d1h64b_: 1h64 B: [76678]
5. Domain d1h64c_: 1h64 C: [76679]
6. Domain d1h64d_: 1h64 D: [76680]
7. Domain d1h64e_: 1h64 E: [76681]
8. Domain d1h64f_: 1h64 F: [76682]
9. Domain d1h64g_: 1h64 G: [76683]
10. Domain d1h64h_: 1h64 H: [76684]
11. Domain d1h64i_: 1h64 I: [76685]
12. Domain d1h64j_: 1h64 J: [76686]
13. Domain d1h64k_: 1h64 K: [76687]
14. Domain d1h64l_: 1h64 L: [76688]
15. Domain d1h64m_: 1h64 M: [76689]
16. Domain d1h64n_: 1h64 N: [76690]
17. Domain d1h64o_: 1h64 O: [76691]
18. Domain d1h64p_: 1h64 P: [76692]
19. Domain d1h64q_: 1h64 Q: [76693]
20. Domain d1h64r_: 1h64 R: [76694]
21. Domain d1h64s_: 1h64 S: [76695]
22. Domain d1h64t_: 1h64 T: [76696]
23. Domain d1h64u_: 1h64 U: [76697]
24. Domain d1h64v_: 1h64 V: [76698]
25. Domain d1h64w_: 1h64 W: [76699]
26. Domain d1h64x_: 1h64 X: [76700]
27. Domain d1h64y_: 1h64 Y: [76701]
28. Domain d1h64z_: 1h64 Z: [76702]
Domain(s) for 1m8v:
1. Domain d1m8va_: 1m8v A: [78814]
2. Domain d1m8vb_: 1m8v B: [78815]
3. Domain d1m8vc_: 1m8v C: [78816]
4. Domain d1m8vd_: 1m8v D: [78817]
5. Domain d1m8ve_: 1m8v E: [78818]
6. Domain d1m8vf_: 1m8v F: [78819]
7. Domain d1m8vg_: 1m8v G: [78820]
8. Domain d1m8vh_: 1m8v H: [78821]
9. Domain d1m8vi_: 1m8v I: [78822]
10. Domain d1m8vj_: 1m8v J: [78823]
11. Domain d1m8vk_: 1m8v K: [78824]
12. Domain d1m8vl_: 1m8v L: [78825]
13. Domain d1m8vm_: 1m8v M: [78826]
14. Domain d1m8vn_: 1m8v N: [78827]
  complexed with a uridine heptamer
  complexed with ca, u

More info for Species Archaeon Pyrococcus abyssi [TaxId:29292] from b.38.1.1 Archaeal homoheptameric Sm protein

Timeline for Species Archaeon Pyrococcus abyssi [TaxId:29292] from b.38.1.1 Archaeal homoheptameric Sm protein:

Species Archaeon Pyrococcus abyssi [TaxId:29292] from b.38.1.1 Archaeal homoheptameric Sm protein first appeared in SCOP 1.63
Species Archaeon Pyrococcus abyssi [TaxId:29292] from b.38.1.1 Archaeal homoheptameric Sm protein appears in SCOP 1.65
Species Archaeon Pyrococcus abyssi [TaxId:29292] from b.38.1.1 Archaeal homoheptameric Sm protein appears in SCOP 1.69
Species Archaeon Pyrococcus abyssi [TaxId:29292] from b.38.1.1 Archaeal homoheptameric Sm protein appears in the current release, SCOPe 2.08, called Species Pyrococcus abyssi [TaxId:29292] from b.38.1.1 Archaeal homoheptameric Sm protein