Lineage for Protein: DNA polymerase beta

  1. Root: SCOP 1.63
  2. 208553Class a: All alpha proteins [46456] (171 folds)
  3. 214550Fold a.60: SAM domain-like [47768] (13 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 214859Superfamily a.60.12: DNA polymerase beta-like, second domain [81585] (1 family) (S)
    contains one classic and one pseudo HhH motifs
  5. 214860Family a.60.12.1: DNA polymerase beta-like, second domain [81584] (2 proteins)
    topological similarity to the N-terminal domain
  6. 214861Protein DNA polymerase beta [81579] (2 species)

Species:

  1. 214862Human (Homo sapiens) [TaxId:9606] [81575] (92 PDB entries)
    1. Domain for 1bpx:
    2. Domain for 1bpy:
    3. Domain for 1bpz:
    4. Domain for 1mq2:
    5. Domain for 1mq3:
    6. Domain for 1zqa:
    7. Domain for 1zqb:
    8. Domain for 1zqc:
    9. Domain for 1zqd:
    10. Domain for 1zqe:
    11. Domain for 1zqf:
    12. Domain for 1zqg:
    13. Domain for 1zqh:
    14. Domain for 1zqi:
    15. Domain for 1zqj:
    16. Domain for 1zqk:
    17. Domain for 1zql:
    18. Domain for 1zqm:
    19. Domain for 1zqn:
    20. Domain for 1zqo:
    21. Domain for 1zqp:
    22. Domain for 1zqq:
    23. Domain for 1zqr:
    24. Domain for 1zqs:
    25. Domain for 1zqt:
    26. Domain for 7ice:
    27. Domain for 7icf:
    28. Domain for 7icg:
    29. Domain for 7ich:
    30. Domain for 7ici:
    31. Domain for 7icj:
    32. Domain for 7ick:
    33. Domain for 7icl:
    34. Domain for 7icm:
    35. Domain for 7icn:
    36. Domain for 7ico:
    37. Domain for 7icp:
    38. Domain for 7icq:
    39. Domain for 7icr:
    40. Domain for 7ics:
    41. Domain for 7ict:
    42. Domain for 7icu:
    43. Domain for 7icv:
    44. Domain for 8ica:
    45. Domain for 8icb:
    46. Domain for 8icc:
    47. Domain for 8ice:
    48. Domain for 8icf:
    49. Domain for 8icg:
    50. Domain for 8ich:
    51. Domain for 8ici:
    52. Domain for 8icj:
    53. Domain for 8ick:
    54. Domain for 8icl:
    55. Domain for 8icm:
    56. Domain for 8icn:
    57. Domain for 8ico:
    58. Domain for 8icp:
    59. Domain for 8icq:
    60. Domain for 8icr:
    61. Domain for 8ics:
    62. Domain for 8ict:
    63. Domain for 8icu:
    64. Domain for 8icv:
    65. Domain for 8icw:
    66. Domain for 8icx:
    67. Domain for 8icy:
    68. Domain for 8icz:
    69. Domain for 9ica:
    70. Domain for 9icb:
    71. Domain for 9icc:
    72. Domain for 9ice:
    73. Domain for 9icf:
    74. Domain for 9icg:
    75. Domain for 9ich:
    76. Domain for 9ici:
    77. Domain for 9icj:
    78. Domain for 9ick:
    79. Domain for 9icl:
    80. Domain for 9icm:
    81. Domain for 9icn:
    82. Domain for 9ico:
    83. Domain for 9icp:
    84. Domain for 9icq:
    85. Domain for 9icr:
    86. Domain for 9ics:
    87. Domain for 9ict:
    88. Domain for 9icu:
    89. Domain for 9icv:
    90. Domain for 9icw:
    91. Domain for 9icx:
    92. Domain for 9icy:
  2. 214955Rat (Rattus norvegicus) [TaxId:10116] [81577] (17 PDB entries)
    1. Domain for 1bpb:
    2. Domain for 1bpd:
    3. Domain for 1bpe:
    4. Domains for 1huo:
      1. 214961Domain d1huoa3: 1huo A:92-148 [75846]
        Other proteins in same PDB: d1huoa1, d1huoa4, d1huob1, d1huob4
      2. 214962Domain d1huob3: 1huo B:92-148 [75848]
        Other proteins in same PDB: d1huoa1, d1huoa4, d1huob1, d1huob4
        complexed with cr, tte
    5. Domains for 1huz:
      1. 214963Domain d1huza3: 1huz A:92-148 [75850]
        Other proteins in same PDB: d1huza1, d1huza4, d1huzb1, d1huzb4
      2. 214964Domain d1huzb3: 1huz B:92-148 [75852]
        Other proteins in same PDB: d1huza1, d1huza4, d1huzb1, d1huzb4
        complexed with cr, mdn
    6. Domain for 1jn3:
    7. Domain for 1nom:
    8. Domain for 1rpl:
    9. Domain for 1zqu:
    10. Domain for 1zqv:
    11. Domain for 1zqw:
    12. Domain for 1zqx:
    13. Domain for 1zqy:
    14. Domain for 1zqz:
    15. Domain for 2bpc:
    16. Domain for 2bpf:
    17. Domains for 2bpg:
      1. 214973Domain d2bpga3: 2bpg A:92-148 [75993]
        Other proteins in same PDB: d2bpga1, d2bpga4, d2bpgb1, d2bpgb4
      2. 214974Domain d2bpgb3: 2bpg B:92-148 [75995]
        Other proteins in same PDB: d2bpga1, d2bpga4, d2bpgb1, d2bpgb4
        protein/DNA complex; complexed with dct, mg

More info for Protein DNA polymerase beta from a.60.12.1: DNA polymerase beta-like, second domain

Timeline for Protein DNA polymerase beta from a.60.12.1: DNA polymerase beta-like, second domain: