Lineage for Species: Rat (Rattus norvegicus)

  1. Root: SCOP 1.67
  2. 349259Class a: All alpha proteins [46456] (202 folds)
  3. 356779Fold a.60: SAM domain-like [47768] (13 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 357148Superfamily a.60.12: DNA polymerase beta-like, second domain [81585] (1 family) (S)
    contains one classic and one pseudo HhH motifs
  5. 357149Family a.60.12.1: DNA polymerase beta-like, second domain [81584] (3 proteins)
    topological similarity to the N-terminal domain
  6. 357150Protein DNA polymerase beta [81579] (2 species)
  7. 357244Species Rat (Rattus norvegicus) [TaxId:10116] [81577] (17 PDB entries)

PDB entries in Species: Rat (Rattus norvegicus):

  1. Domain(s) for 1bpb:
  2. Domain(s) for 1bpd:
  3. Domain(s) for 1bpe:
  4. Domain(s) for 1huo:
    1. 357250Domain d1huoa3: 1huo A:92-148 [75846]
      Other proteins in same PDB: d1huoa1, d1huoa4, d1huob1, d1huob4
    2. 357251Domain d1huob3: 1huo B:92-148 [75848]
      Other proteins in same PDB: d1huoa1, d1huoa4, d1huob1, d1huob4
      complexed with cr, tte
  5. Domain(s) for 1huz:
    1. 357252Domain d1huza3: 1huz A:92-148 [75850]
      Other proteins in same PDB: d1huza1, d1huza4, d1huzb1, d1huzb4
    2. 357253Domain d1huzb3: 1huz B:92-148 [75852]
      Other proteins in same PDB: d1huza1, d1huza4, d1huzb1, d1huzb4
      complexed with cr, mdn
  6. Domain(s) for 1jn3:
  7. Domain(s) for 1nom:
  8. Domain(s) for 1rpl:
  9. Domain(s) for 1zqu:
  10. Domain(s) for 1zqv:
  11. Domain(s) for 1zqw:
  12. Domain(s) for 1zqx:
  13. Domain(s) for 1zqy:
  14. Domain(s) for 1zqz:
  15. Domain(s) for 2bpc:
  16. Domain(s) for 2bpf:
  17. Domain(s) for 2bpg:
    1. 357262Domain d2bpga3: 2bpg A:92-148 [75993]
      Other proteins in same PDB: d2bpga1, d2bpga4, d2bpgb1, d2bpgb4
    2. 357263Domain d2bpgb3: 2bpg B:92-148 [75995]
      Other proteins in same PDB: d2bpga1, d2bpga4, d2bpgb1, d2bpgb4
      protein/DNA complex; complexed with dct, mg

More info for Species Rat (Rattus norvegicus) [TaxId:10116] from a.60.12.1 DNA polymerase beta

Timeline for Species Rat (Rattus norvegicus) [TaxId:10116] from a.60.12.1 DNA polymerase beta: