Lineage for Protein: Bacterial ba3 type cytochrome c oxidase subunit II

  1. Root: SCOPe 2.08
  2. 3021034Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. 3023860Fold f.17: Transmembrane helix hairpin [81334] (6 superfamilies)
    two antiparallel transmembrane helices
  4. 3024004Superfamily f.17.2: Cytochrome c oxidase subunit II-like, transmembrane region [81464] (2 families) (S)
  5. 3024005Family f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region [81463] (5 proteins)
  6. 3024027Protein Bacterial ba3 type cytochrome c oxidase subunit II [81460] (1 species)

Species:

  • 3024028Thermus thermophilus [TaxId:274] [81459] (23 PDB entries)
    the "missing" first helix is complemented by the ba3 subunit IIa
    1. Domain for 1ehk:
      • 3024036Domain d1ehkb2: 1ehk B:3-40 [43625]
        Other proteins in same PDB: d1ehka_, d1ehkb1, d1ehkc_
        complexed with bng, cu, cua, has, hem
        fragment; missing more than one-third of the common structure and/or sequence
    2. Domain for 1xme:
    3. Domain for 2qpd:
      • 3024051Domain d2qpdb2: 2qpd B:3-36 [151200]
        Other proteins in same PDB: d2qpdb1, d2qpdc1
        automatically matched to d1ehkb2
        complexed with cu1, cua, has, hem

        fragment; missing more than one-third of the common structure and/or sequence
    4. Domain for 3bvd:
      • 3024050Domain d3bvdb2: 3bvd B:3-36 [155661]
        Other proteins in same PDB: d3bvdb1, d3bvdc1
        automatically matched to d1ehkb2
        complexed with cu, cua, has, hem, xe

        fragment; missing more than one-third of the common structure and/or sequence
    5. Domain for 3qjq:
    6. Domain for 3qju:
    7. Domain for 3qjv:
    8. Domain for 3s8f:
    9. Domain for 3s8g:
      • 3024030Domain d3s8gb1: 3s8g B:3-40 [200598]
        Other proteins in same PDB: d3s8ga_, d3s8gb2, d3s8gc_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, per; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    10. Domain for 4esl:
      • 3024038Domain d4eslb1: 4esl B:3-40 [307306]
        Other proteins in same PDB: d4esla_, d4eslb2
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    11. Domain for 4ev3:
      • 3024034Domain d4ev3b1: 4ev3 B:3-40 [307309]
        Other proteins in same PDB: d4ev3a_, d4ev3b2
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, peo; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    12. Domain for 4f05:
      • 3024040Domain d4f05b1: 4f05 B:3-40 [307317]
        Other proteins in same PDB: d4f05a_, d4f05b2
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    13. Domain for 4fa7:
      • 3024032Domain d4fa7b1: 4fa7 B:3-40 [202021]
        Other proteins in same PDB: d4fa7a_, d4fa7b2, d4fa7c_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, peo; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    14. Domain for 4faa:
      • 3024041Domain d4faab1: 4faa B:3-40 [202024]
        Other proteins in same PDB: d4faaa_, d4faab2, d4faac_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, peo; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    15. Domain for 4g70:
      • 3024045Domain d4g70b1: 4g70 B:3-40 [221735]
        Other proteins in same PDB: d4g70a_, d4g70b2, d4g70c_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, per; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    16. Domain for 4g71:
      • 3024042Domain d4g71b1: 4g71 B:3-40 [221738]
        Other proteins in same PDB: d4g71a_, d4g71b2, d4g71c_
        automated match to d1ehkb2
        complexed with cua, cub, has, hem, olc, per; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    17. Domain for 4g7q:
      • 3024043Domain d4g7qb1: 4g7q B:3-40 [221750]
        Other proteins in same PDB: d4g7qa_, d4g7qb2, d4g7qc_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, per; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    18. Domain for 4g7s:
      • 3024029Domain d4g7sb1: 4g7s B:3-40 [221753]
        Other proteins in same PDB: d4g7sa_, d4g7sb2, d4g7sc_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, per; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    19. Domain for 4gp4:
      • 3024039Domain d4gp4b1: 4gp4 B:3-40 [222062]
        Other proteins in same PDB: d4gp4a_, d4gp4b2, d4gp4c_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, per; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    20. Domain for 4gp5:
      • 3024033Domain d4gp5b1: 4gp5 B:3-40 [222066]
        Other proteins in same PDB: d4gp5a_, d4gp5b2, d4gp5c_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, per; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    21. Domain for 4gp8:
      • 3024037Domain d4gp8b1: 4gp8 B:3-40 [222070]
        Other proteins in same PDB: d4gp8a_, d4gp8b2, d4gp8c_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, per; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    22. Domain for 4n4y:
      • 3024046Domain d4n4yb1: 4n4y B:3-40 [260187]
        Other proteins in same PDB: d4n4ya_, d4n4yb2, d4n4yc_
        automated match to d1ehkb2
        complexed with cu, cua, has, hem, olc, peo; mutant

        fragment; missing more than one-third of the common structure and/or sequence
    23. Domain for 5ndc:

More info for Protein Bacterial ba3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region

Timeline for Protein Bacterial ba3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region:

  • Protein Bacterial ba3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region first appeared in SCOP 1.63
  • Protein Bacterial ba3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region appears in SCOPe 2.07