SCOPe 2.08: Protein: Bacterial aa3 type cytochrome c oxidase subunit I

Lineage for Protein: Bacterial aa3 type cytochrome c oxidase subunit I

Root: SCOPe 2.08
Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
Fold f.24: Cytochrome c oxidase subunit I-like [81443] (1 superfamily)
12 transmembrane helices in an approximate threefold rotational symmetric arrangement
Superfamily f.24.1: Cytochrome c oxidase subunit I-like [81442] (1 family)
Family f.24.1.1: Cytochrome c oxidase subunit I-like [81441] (5 proteins)
the largest and best conserved subunit, contains two heme groups, low spin heme a and high spin heme a3
Protein Bacterial aa3 type cytochrome c oxidase subunit I [81436] (2 species)

Species:

Paracoccus denitrificans [TaxId:266] [81434] (2 PDB entries)
1. Domain for 1ar1:
  - Domain d1ar1a_: 1ar1 A: [43618]
    Other proteins in same PDB: d1ar1b1, d1ar1b2, d1ar1c_, d1ar1d_
    complexed with ca, cu, hea, lda, mg
2. Domain for 1qle:
  - Domain d1qlea_: 1qle A: [43620]
    Other proteins in same PDB: d1qleb1, d1qleb2, d1qlec_, d1qled_, d1qleh_, d1qlel_
    complexed with ca, cu, cua, hea, mn, pc1

Rhodobacter sphaeroides [TaxId:1063] [81435] (7 PDB entries)

Domains for 1m56:
1. Domain d1m56a_: 1m56 A: [74471]
  Other proteins in same PDB: d1m56b1, d1m56b2, d1m56c_, d1m56d_, d1m56h1, d1m56h2, d1m56i_, d1m56j_
  complexed with 3pe, ca, cu, hea, mg
2. Domain d1m56g_: 1m56 G: [74476]
  Other proteins in same PDB: d1m56b1, d1m56b2, d1m56c_, d1m56d_, d1m56h1, d1m56h2, d1m56i_, d1m56j_
  complexed with 3pe, ca, cu, hea, mg
Domains for 1m57:
1. Domain d1m57a_: 1m57 A: [74481]
  Other proteins in same PDB: d1m57b1, d1m57b2, d1m57c_, d1m57d_, d1m57h1, d1m57h2, d1m57i_, d1m57j_
  complexed with 3pe, ca, cu, hea, mg; mutant
2. Domain d1m57g_: 1m57 G: [74486]
  Other proteins in same PDB: d1m57b1, d1m57b2, d1m57c_, d1m57d_, d1m57h1, d1m57h2, d1m57i_, d1m57j_
  complexed with 3pe, ca, cu, hea, mg; mutant
Domains for 2gsm:
1. Domain d2gsma_: 2gsm A: [135589]
  Other proteins in same PDB: d2gsmb1, d2gsmb2, d2gsmb3, d2gsmd1, d2gsmd2, d2gsmd3
  automated match to d1m56a_
  complexed with ca, cd, cu, dmu, hea, mg, oh, trd
2. Domain d2gsmc_: 2gsm C: [135592]
  Other proteins in same PDB: d2gsmb1, d2gsmb2, d2gsmb3, d2gsmd1, d2gsmd2, d2gsmd3
  automated match to d1m56a_
  complexed with ca, cd, cu, dmu, hea, mg, oh, trd

Domains for 3dtu:

Domain d3dtua_: 3dtu A: [157856]
Other proteins in same PDB: d3dtub1, d3dtub2, d3dtub3, d3dtud1, d3dtud2, d3dtud3
automated match to d1m56a_
complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd

Domain d3dtuc_: 3dtu C: [157859]
Other proteins in same PDB: d3dtub1, d3dtub2, d3dtub3, d3dtud1, d3dtud2, d3dtud3
automated match to d1m56a_
complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd

Domains for 3fye:
1. Domain d3fyea_: 3fye A: [176137]
  Other proteins in same PDB: d3fyeb1, d3fyeb2, d3fyeb3, d3fyed1, d3fyed2, d3fyed3
  automated match to d1m56a_
  complexed with ca, cd, cu1, dmu, hea, hto, mg, trd, unx
2. Domain d3fyec_: 3fye C: [176138]
  Other proteins in same PDB: d3fyeb1, d3fyeb2, d3fyeb3, d3fyed1, d3fyed2, d3fyed3
  automated match to d1m56a_
  complexed with ca, cd, cu1, dmu, hea, hto, mg, trd, unx
Domains for 3fyi:
1. Domain d3fyia_: 3fyi A: [176139]
  Other proteins in same PDB: d3fyib1, d3fyib2, d3fyib3, d3fyid1, d3fyid2, d3fyid3
  automated match to d1m56a_
  complexed with ca, cd, cu1, cyn, dmu, hea, hto, mg, trd
2. Domain d3fyic_: 3fyi C: [176140]
  Other proteins in same PDB: d3fyib1, d3fyib2, d3fyib3, d3fyid1, d3fyid2, d3fyid3
  automated match to d1m56a_
  complexed with ca, cd, cu1, cyn, dmu, hea, hto, mg, trd

Domains for 6ci0:

Domain d6ci0a_: 6ci0 A: [351404]
Other proteins in same PDB: d6ci0b1, d6ci0b2, d6ci0b3, d6ci0d1, d6ci0d2, d6ci0d3
automated match to d3omaa_
complexed with ca, cd, cu, dmu, hea, hth, k, mg, trd, trs; mutant

Domain d6ci0c_: 6ci0 C: [351405]
Other proteins in same PDB: d6ci0b1, d6ci0b2, d6ci0b3, d6ci0d1, d6ci0d2, d6ci0d3
automated match to d3omaa_
complexed with ca, cd, cu, dmu, hea, hth, k, mg, trd, trs; mutant

More info for Protein Bacterial aa3 type cytochrome c oxidase subunit I from f.24.1.1: Cytochrome c oxidase subunit I-like

Timeline for Protein Bacterial aa3 type cytochrome c oxidase subunit I from f.24.1.1: Cytochrome c oxidase subunit I-like:

Protein Bacterial aa3 type cytochrome c oxidase subunit I from f.24.1.1: Cytochrome c oxidase subunit I-like first appeared in SCOP 1.63
Protein Bacterial aa3 type cytochrome c oxidase subunit I from f.24.1.1: Cytochrome c oxidase subunit I-like appears in SCOPe 2.07