Lineage for Species: Rhodobacter sphaeroides [TaxId: 1063]

  1. Root: SCOPe 2.08
  2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. Fold f.24: Cytochrome c oxidase subunit I-like [81443] (1 superfamily)
    12 transmembrane helices in an approximate threefold rotational symmetric arrangement
  4. Superfamily f.24.1: Cytochrome c oxidase subunit I-like [81442] (1 family) (S)
  5. Family f.24.1.1: Cytochrome c oxidase subunit I-like [81441] (5 proteins)
    the largest and best conserved subunit, contains two heme groups, low spin heme a and high spin heme a3
  6. Protein Bacterial aa3 type cytochrome c oxidase subunit I [81436] (2 species)
  7. Species Rhodobacter sphaeroides [TaxId:1063] [81435] (7 PDB entries)

PDB entries in Species: Rhodobacter sphaeroides [TaxId: 1063]:

  1. Domain(s) for 1m56:
    1. Domain d1m56a_: 1m56 A: [74471]
      Other proteins in same PDB: d1m56b1, d1m56b2, d1m56c_, d1m56d_, d1m56h1, d1m56h2, d1m56i_, d1m56j_
      complexed with 3pe, ca, cu, hea, mg
    2. Domain d1m56g_: 1m56 G: [74476]
      Other proteins in same PDB: d1m56b1, d1m56b2, d1m56c_, d1m56d_, d1m56h1, d1m56h2, d1m56i_, d1m56j_
      complexed with 3pe, ca, cu, hea, mg
  2. Domain(s) for 1m57:
    1. Domain d1m57a_: 1m57 A: [74481]
      Other proteins in same PDB: d1m57b1, d1m57b2, d1m57c_, d1m57d_, d1m57h1, d1m57h2, d1m57i_, d1m57j_
      complexed with 3pe, ca, cu, hea, mg; mutant
    2. Domain d1m57g_: 1m57 G: [74486]
      Other proteins in same PDB: d1m57b1, d1m57b2, d1m57c_, d1m57d_, d1m57h1, d1m57h2, d1m57i_, d1m57j_
      complexed with 3pe, ca, cu, hea, mg; mutant
  3. Domain(s) for 2gsm:
    1. Domain d2gsma_: 2gsm A: [135589]
      Other proteins in same PDB: d2gsmb1, d2gsmb2, d2gsmb3, d2gsmd1, d2gsmd2, d2gsmd3
      automated match to d1m56a_
      complexed with ca, cd, cu, dmu, hea, mg, oh, trd
    2. Domain d2gsmc_: 2gsm C: [135592]
      Other proteins in same PDB: d2gsmb1, d2gsmb2, d2gsmb3, d2gsmd1, d2gsmd2, d2gsmd3
      automated match to d1m56a_
      complexed with ca, cd, cu, dmu, hea, mg, oh, trd
  4. Domain(s) for 3dtu:
    1. Domain d3dtua_: 3dtu A: [157856]
      Other proteins in same PDB: d3dtub1, d3dtub2, d3dtub3, d3dtud1, d3dtud2, d3dtud3
      automated match to d1m56a_
      complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd
    2. Domain d3dtuc_: 3dtu C: [157859]
      Other proteins in same PDB: d3dtub1, d3dtub2, d3dtub3, d3dtud1, d3dtud2, d3dtud3
      automated match to d1m56a_
      complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd
  5. Domain(s) for 3fye:
    1. Domain d3fyea_: 3fye A: [176137]
      Other proteins in same PDB: d3fyeb1, d3fyeb2, d3fyeb3, d3fyed1, d3fyed2, d3fyed3
      automated match to d1m56a_
      complexed with ca, cd, cu1, dmu, hea, hto, mg, trd, unx
    2. Domain d3fyec_: 3fye C: [176138]
      Other proteins in same PDB: d3fyeb1, d3fyeb2, d3fyeb3, d3fyed1, d3fyed2, d3fyed3
      automated match to d1m56a_
      complexed with ca, cd, cu1, dmu, hea, hto, mg, trd, unx
  6. Domain(s) for 3fyi:
    1. Domain d3fyia_: 3fyi A: [176139]
      Other proteins in same PDB: d3fyib1, d3fyib2, d3fyib3, d3fyid1, d3fyid2, d3fyid3
      automated match to d1m56a_
      complexed with ca, cd, cu1, cyn, dmu, hea, hto, mg, trd
    2. Domain d3fyic_: 3fyi C: [176140]
      Other proteins in same PDB: d3fyib1, d3fyib2, d3fyib3, d3fyid1, d3fyid2, d3fyid3
      automated match to d1m56a_
      complexed with ca, cd, cu1, cyn, dmu, hea, hto, mg, trd
  7. Domain(s) for 6ci0:
    1. Domain d6ci0a_: 6ci0 A: [351404]
      Other proteins in same PDB: d6ci0b1, d6ci0b2, d6ci0b3, d6ci0d1, d6ci0d2, d6ci0d3
      automated match to d3omaa_
      complexed with ca, cd, cu, dmu, hea, hth, k, mg, trd, trs; mutant
    2. Domain d6ci0c_: 6ci0 C: [351405]
      Other proteins in same PDB: d6ci0b1, d6ci0b2, d6ci0b3, d6ci0d1, d6ci0d2, d6ci0d3
      automated match to d3omaa_
      complexed with ca, cd, cu, dmu, hea, hth, k, mg, trd, trs; mutant

More info for Species Rhodobacter sphaeroides [TaxId:1063] from f.24.1.1 Bacterial aa3 type cytochrome c oxidase subunit I

Timeline for Species Rhodobacter sphaeroides [TaxId:1063] from f.24.1.1 Bacterial aa3 type cytochrome c oxidase subunit I: