SCOPe 2.07: Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain

Lineage for Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.5: p53-like transcription factors [49417] (8 families)

5. Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain [81315] (7 proteins)
   automatically mapped to Pfam PF00554

Proteins:

1. Dorsal homologue Gambif1 [49431] (1 species)

   • Species African malaria mosquito (Anopheles gambiae) [TaxId:7165] [49432] (1 PDB entry)

2. p50 subunit of NF-kappa B (NFKB), N-terminal domain [49423] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [49424] (2 PDB entries)

   2. Species Mouse (Mus musculus) [TaxId:10090] [49425] (7 PDB entries)

3. p52 subunit of NF-kappa B (NFKB), N-terminal domain [49426] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [49427] (1 PDB entry)

4. p65 subunit of NF-kappa B (NFKB), N-terminal domain [49428] (3 species)

   1. Species Chicken (Gallus gallus), C-rel [TaxId:9031] [74867] (1 PDB entry)

   2. Species Human (Homo sapiens) [TaxId:9606] [49430] (1 PDB entry)

   3. Species Mouse (Mus musculus) [TaxId:10090] [49429] (8 PDB entries)

5. T-cell transcription factor NFAT1 (NFATC), DNA-binding domain [49421] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [49422] (9 PDB entries)

6. T-cell transcription factor NFAT5 (TONEBP), DNA-binding domain [69185] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [69186] (1 PDB entry)

7. automated matches [254629] (2 species)
   not a true protein

   1. Species Human (Homo sapiens) [TaxId:9606] [255799] (1 PDB entry)

   2. Species Mouse (Mus musculus) [TaxId:10090] [255600] (3 PDB entries)

More info for Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain

Timeline for Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain:

• Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain first appeared in SCOP 1.63
  
• Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain appears in SCOPe 2.06
  
• Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain appears in the current release, SCOPe 2.08