Lineage for Superfamily b.1.18: E set domains

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 781542Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 788950Superfamily b.1.18: E set domains [81296] (23 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies

Families:

  1. 788951b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain [81279] (7 proteins)
    subgroup of the larger IPT/TIG domain family
  2. 789056b.1.18.2: E-set domains of sugar-utilizing enzymes [81282] (20 proteins)
    domains of unknown function associated with different type of catalytic domains in a different sequential location
    subgroup of the larger IPT/TIG domain family
  3. 789303b.1.18.3: Arthropod hemocyanin, C-terminal domain [81283] (1 protein)
  4. 789318b.1.18.4: Class II viral fusion proteins C-terminal domain [81284] (2 proteins)
  5. 789367b.1.18.5: Cytomegalovirus protein US2 [81285] (1 protein)
  6. 789374b.1.18.6: Molybdenum-containing oxidoreductases-like dimerisation domain [81286] (1 protein)
  7. 789390b.1.18.7: ML domain [81287] (2 proteins)
    implicated in lipid recognition, particularly in the recognition of pathogen related products
  8. 789412b.1.18.8: RhoGDI-like [81288] (2 proteins)
  9. 789453b.1.18.9: Transglutaminase N-terminal domain [81289] (1 protein)
  10. 789498b.1.18.10: Filamin repeat (rod domain) [81290] (4 proteins)
    Pfam PF00630
  11. 789547b.1.18.11: Arrestin/Vps26-like [81291] (1 protein)
  12. 789577b.1.18.12: Gingipain R (RgpB), C-terminal domain [81292] (1 protein)
  13. 789581b.1.18.13: Cellulosomal scaffoldin protein CipC, module x2.1 [81293] (1 protein)
  14. 789585b.1.18.14: Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 [81294] (1 protein)
  15. 789597b.1.18.15: Internalin Ig-like domain [81295] (3 proteins)
    truncated fold fused to an LRR domain
  16. 789618b.1.18.16: Cytoplasmic domain of inward rectifier potassium channel [81966] (3 proteins)
  17. 789632b.1.18.17: Copper resistance protein C (CopC, PcoC) [81969] (1 protein)
  18. 789647b.1.18.18: Other IPT/TIG domains [89191] (1 protein)
    apart from the domains of transcription factors and sugar-utilizing enzymes
  19. 789653b.1.18.19: SoxZ-like [141027] (1 protein)
  20. 789658b.1.18.20: Enterochelin esterase N-terminal domain-like [141030] (1 protein)
    PfamB PB013071
  21. 789673b.1.18.21: AMPK-beta glycogen binding domain-like [158886] (3 proteins)
    lacks the N-terminal strand (A) and contains a beta-hairpin insertion in the C-terminal strand (G)
  22. 789689b.1.18.22: Sec63 C-terminal domain-like [158893] (1 protein)
    C-terminal part of Pfam PF02889
  23. 789693b.1.18.23: SVA-like [158896] (1 protein)
    Pfam PF05326

More info for Superfamily b.1.18: E set domains

Timeline for Superfamily b.1.18: E set domains: