SCOPe 2.06: Domain d1nmuc1: 1nmu C:3-366

Lineage for d1nmuc1 (1nmu C:3-366)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)

6. Protein D-maltodextrin-binding protein, MBP [53862] (5 species)
   contains a few additional helices in the C-terminal extension; homologous to thiaminase I

7. Species Escherichia coli [TaxId:562] [53863] (65 PDB entries)
   Uniprot P02928

8. Domain d1nmuc1: 1nmu C:3-366 [80667]
   Other proteins in same PDB: d1nmua2, d1nmub_, d1nmuc2, d1nmud_
   chimera with yeast L30e ribosomal protein
   complexed with mtt

Details for d1nmuc1

PDB Entry: 1nmu, 2.31 Å

PDB Description: mbp-l30

PDB Compounds: (C:) Maltose-binding periplasmic protein

SCOPe Domain Sequences for d1nmuc1:

Sequence; same for both SEQRES and ATOM records:

>d1nmuc1 c.94.1.1 (C:3-366) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]}
eegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifw
ahdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkdll
pnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyengkydikdvg
vdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtskvny
gvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgav
alksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdealk
daqt

Timeline for d1nmuc1:

• d1nmuc1 first appeared in SCOP 1.63, called d1nmuc_
  
• d1nmuc1 was called d1nmuc_ in SCOPe 2.05
  
• d1nmuc1 appears in SCOPe 2.07
  
• d1nmuc1 appears in the current release, SCOPe 2.08