Lineage for d1nlbl1 (1nlb L:1-107)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1510240Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1510241Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1510242Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 1511401Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 1511793Species Mouse (Mus musculus), cluster 1.2 [TaxId:10090] [88525] (46 PDB entries)
  8. 1511797Domain d1nlbl1: 1nlb L:1-107 [80623]
    Other proteins in same PDB: d1nlbh1, d1nlbh2, d1nlbl2
    part of anti-HCV Fab 19D9D6

Details for d1nlbl1

PDB Entry: 1nlb (more details), 1.6 Å

PDB Description: crystal structure of anti-HCV monoclonal antibody 19D9D6
PDB Compounds: (L:) antibody 19D9D6 light chain

SCOPe Domain Sequences for d1nlbl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1nlbl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2 [TaxId: 10090]}

SCOPe Domain Coordinates for d1nlbl1:

Click to download the PDB-style file with coordinates for d1nlbl1.
(The format of our PDB-style files is described here.)

Timeline for d1nlbl1:

View in 3D
Domains from same chain:
(mouse over for more information)