SCOPe 2.06: Domain d1mm8a1: 1mm8 A:5-476

Lineage for d1mm8a1 (1mm8 A:5-476)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (15 families)
   consists of one domain of this fold

5. Family c.55.3.4: Transposase inhibitor (Tn5 transposase) [53115] (1 protein)

6. Protein Transposase inhibitor (Tn5 transposase) [53116] (1 species)
   contains additional all-alpha subdomains in both N- and C-terminal regions

7. Species Escherichia coli [TaxId:562] [53117] (6 PDB entries)

8. Domain d1mm8a1: 1mm8 A:5-476 [79301]
   Other proteins in same PDB: d1mm8a2
   complexed with Me DNA
   protein/DNA complex; complexed with mn

Details for d1mm8a1

PDB Entry: 1mm8, 2.8 Å

PDB Description: crystal structure of tn5 transposase complexed with me dna

PDB Compounds: (A:) Tn5 Transposase

SCOPe Domain Sequences for d1mm8a1:

Sequence, based on SEQRES records:

>d1mm8a1 c.55.3.4 (A:5-476) Transposase inhibitor (Tn5 transposase) {Escherichia coli [TaxId: 562]}
alhraadwaksvfssaalgdprrtarlvnvaaqlakysgksitissegskaaqegayrfi
rnpnvsaeairkagamqtvklaqefpellaiedttslsyrhqvaeelgklgsiqdksrgw
wvhsvllleattfrtvgllhqewwmrpddpadadekesgkwlaaaatsrlrmgsmmsnvi
avcdreadihaylqdklahnerfvvrskhprkdvesglylydhlknqpelggyqisipqk
gvvdkrgkrknrparkaslslrsgritlkqgnitlnavlaeeinppkgetplkwllltse
pveslaqalrvidiythrwrieefhkawktgagaerqrmekpdnlermvsilsfvavrll
qlresftppqalraqgllkeaehvesqsaetvltpdecqllgyldkgkrkrkekagslqw
aymaiarlggfmdskrtgiaswgalwegwealqskldgflaakdlmaqgiki

Sequence, based on observed residues (ATOM records):

>d1mm8a1 c.55.3.4 (A:5-476) Transposase inhibitor (Tn5 transposase) {Escherichia coli [TaxId: 562]}
alhraadwaksvfssaalgdprrtarlvnvaaqlakysgksitissegskaaqegayrfi
rnpnvsaeairkagamqtvklaqefpellaiedttslsyrhqvaeelgklgsiqdksrgw
wvhsvllleattfrtvgllhqewwmrpddpadadekesgkwlaaaatsrlrmgsmmsnvi
avcdreadihaylqdklahnerfvvrskhprkdvesglylydhlknqpelggyqisipqk
gvvdkrgkrknrparkaslslrsgritlkqgnitlnavlaeeinppkgetplkwllltse
pveslaqalrvidiythrwrieefhkawktgagaerqrmekpdnlermvsilsfvavrll
qlresftpqsaetvltpdecqllgyldkgkrkrkekagslqwaymaiarlggfmdskrtg
iaswgalwegwealqskldgflaakdlmaqgiki

Timeline for d1mm8a1:

• d1mm8a1 first appeared in SCOP 1.63, called d1mm8a_
  
• d1mm8a1 was called d1mm8a_ in SCOPe 2.05
  
• d1mm8a1 appears in SCOPe 2.07
  
• d1mm8a1 appears in the current release, SCOPe 2.08