SCOPe 2.08: Domain d1m6xd1: 1m6x D:2-129

Lineage for d1m6xd1 (1m6x D:2-129)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.60: SAM domain-like [47768] (17 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.9: lambda integrase-like, N-terminal domain [47823] (2 families)

5. Family a.60.9.1: lambda integrase-like, N-terminal domain [47824] (3 proteins)

6. Protein Flp recombinase [47829] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [47830] (3 PDB entries)

8. Domain d1m6xd1: 1m6x D:2-129 [78714]
   Other proteins in same PDB: d1m6xa2, d1m6xb2, d1m6xc2, d1m6xd2
   protein/DNA complex

Details for d1m6xd1

PDB Entry: 1m6x, 2.8 Å

PDB Description: flpe-holliday junction complex

PDB Compounds: (D:) flp recombinase

SCOPe Domain Sequences for d1m6xd1:

Sequence, based on SEQRES records:

>d1m6xd1 a.60.9.1 (D:2-129) Flp recombinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
sqfdilcktppkvlvrqfverferpsgekiascaaeltylcwmithngtaikratfmsyn
tiisnslsfdivnkslqfkyktqkatileaslkklipaweftiipyngqkhqsditdivs
slqlqfes

Sequence, based on observed residues (ATOM records):

>d1m6xd1 a.60.9.1 (D:2-129) Flp recombinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
sqfdilcktppkvlvrqfverferpsgekiascaaeltylcwmithngtaikratfmsyn
tiisnslsfdivnkslqfkyktqkatileaslkklipaweftiipynsditdivsslqlq
fes

Timeline for d1m6xd1:

• d1m6xd1 first appeared in SCOP 1.63
  
• d1m6xd1 appears in SCOPe 2.07