SCOPe 2.06: Domain d1j6ua2: 1j6u A:296-446

Lineage for d1j6ua2 (1j6u A:296-446)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.59: MurD-like peptide ligases, peptide-binding domain [53243] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the rest

4. Superfamily c.59.1: MurD-like peptide ligases, peptide-binding domain [53244] (3 families)

5. Family c.59.1.1: MurCDEF C-terminal domain [53245] (4 proteins)

6. Protein UDP-N-acetylmuramate-alanine ligase MurC [82452] (2 species)

7. Species Thermotoga maritima [TaxId:2336] [82453] (1 PDB entry)
   TM0231

8. Domain d1j6ua2: 1j6u A:296-446 [77095]
   Other proteins in same PDB: d1j6ua1, d1j6ua3, d1j6ua4
   structural genomics

Details for d1j6ua2

PDB Entry: 1j6u, 2.3 Å

PDB Description: crystal structure of udp-n-acetylmuramate-alanine ligase murc (tm0231) from thermotoga maritima at 2.3 a resolution

PDB Compounds: (A:) UDP-N-acetylmuramate-alanine ligase MurC

SCOPe Domain Sequences for d1j6ua2:

Sequence, based on SEQRES records:

>d1j6ua2 c.59.1.1 (A:296-446) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
gvhrrfsiafhdpetniyviddyahtpdeirnllqtakevfenekivvifqphrysrler
edgnfakalqladevvvtevydafeekkngisgkmiwdslkslgkeayfveklpelekvi
svsentvflfvgagdiiyssrrfveryqssk

Sequence, based on observed residues (ATOM records):

>d1j6ua2 c.59.1.1 (A:296-446) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
gvhrrfsiafhdpetniyviddyahtpdeirnllqtakevfenekivvifqphrgnfaka
lqladevvvtevydsgkmiwdslkslgkeayfveklpelekvisvsentvflfvgagdii
yssrrfveryqssk

Timeline for d1j6ua2:

• d1j6ua2 first appeared in SCOP 1.63
  
• d1j6ua2 appears in SCOPe 2.05
  
• d1j6ua2 appears in SCOPe 2.07
  
• d1j6ua2 appears in the current release, SCOPe 2.08