Lineage for d1ij6a_ (1ij6 A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1996349Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. 1996350Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. 1997700Family a.39.1.9: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) [81758] (1 protein)
    4 EF-hands assembled in a compact structure like the Penta-EF-hand proteins; contains additional N-terminal all-alpha subdomain
  6. 1997701Protein Cbp40 (plasmodial specific CaII-binding protein LAV1-2) [81759] (1 species)
  7. 1997702Species Slime mold (Physarum polycephalum) [TaxId:5791] [81760] (2 PDB entries)
  8. 1997704Domain d1ij6a_: 1ij6 A: [76749]
    complexed with ca

Details for d1ij6a_

PDB Entry: 1ij6 (more details), 3.1 Å

PDB Description: ca2+-bound structure of multidomain ef-hand protein, cbp40, from true slime mold
PDB Compounds: (A:) plasmodial specific lav1-2 protein

SCOPe Domain Sequences for d1ij6a_:

Sequence, based on SEQRES records: (download)

>d1ij6a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Slime mold (Physarum polycephalum) [TaxId: 5791]}
eifsqeltqreanvkkvhenleelqkkldhtsfahkedrdrleaqiaqkeqeqkaklaey
dqkvqnefdareraerereaargdaaaekqrlasllkdleddasgynrlrpskpmlseed
tnilrqlflssavsgsgkfsfqdlkqvlakyadtipegplkklfvmvendtkgrmsyitl
vavandlaalvadfrkidtnsngtlsrkefrehfvrlgfdkksvqdalfryadedesddv
gfseyvhlglcllvlrilyafadfdksgqlskeevqkvledahipesarkkfehqfsvvd
vddskslsyqefvmlvllmfh

Sequence, based on observed residues (ATOM records): (download)

>d1ij6a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Slime mold (Physarum polycephalum) [TaxId: 5791]}
eifsqeltqreanvkkvhenleelqkkldhtsfahdrleaqiaqkeqeqkaklaeydqkv
qnefdareraerereaargdaaaekqrlasllkdlekpmlseedtnilrqlflssavsgs
gkfsfqdlkqvlakyadtipegplkklfvmvendtkgrmsyitlvavandlaalvadfrk
idtnsngtlsrkefrehfvrlgfdkksvqdalfryadedesddvgfseyvhlglcllvlr
ilyafadfdksgqlskeevqkvledahipesarkkfehqfsvvdvddskslsyqefvmlv
llmfh

SCOPe Domain Coordinates for d1ij6a_:

Click to download the PDB-style file with coordinates for d1ij6a_.
(The format of our PDB-style files is described here.)

Timeline for d1ij6a_: