Lineage for d1h0mc1 (1h0m C:171-234)

  1. Root: SCOP 1.63
  2. 208553Class a: All alpha proteins [46456] (171 folds)
  3. 210246Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (11 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 210981Superfamily a.4.6: C-terminal effector domain of the bipartite response regulators [46894] (3 families) (S)
    binds to DNA and RNA polymerase; the N-terminal, receiver domain belongs to the CheY family
  5. 210997Family a.4.6.2: GerE-like (LuxR/UhpA family of transcriptional regulators) [46900] (3 proteins)
    contains additional, fourth helix in the C-terminal extension
  6. 211015Protein Quorum-sensing transcription factor TraR, C-terminal domain [74690] (1 species)
  7. 211016Species Agrobacterium tumefaciens [TaxId:358] [74691] (2 PDB entries)
  8. 211023Domain d1h0mc1: 1h0m C:171-234 [76446]
    Other proteins in same PDB: d1h0ma2, d1h0mb2, d1h0mc2, d1h0md2

Details for d1h0mc1

PDB Entry: 1h0m (more details), 3 Å

PDB Description: three-dimensional structure of the quorum sensing protein trar bound to its autoinducer and to its target dna

SCOP Domain Sequences for d1h0mc1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1h0mc1 a.4.6.2 (C:171-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens}
aawldpkeatylrwiavgktmeeiadvegvkynsvrvklreamkrfdvrskahltalair
rkli

SCOP Domain Coordinates for d1h0mc1:

Click to download the PDB-style file with coordinates for d1h0mc1.
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Timeline for d1h0mc1: