SCOP 1.63: Domain d1epvb2: 1epv B:12-244

Lineage for d1epvb2 (1epv B:12-244)

1. Root: SCOP 1.63

2. Class c: Alpha and beta proteins (a/b) [51349] (117 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.6: PLP-binding barrel [51419] (2 families)
   circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand

5. Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (2 proteins)

6. Protein Alanine racemase [51421] (1 species)

7. Species Bacillus stearothermophilus [TaxId:1422] [51422] (7 PDB entries)

8. Domain d1epvb2: 1epv B:12-244 [76149]
   Other proteins in same PDB: d1epva1, d1epvb1
   complexed with kcx, scp

Details for d1epvb2

PDB Entry: 1epv, 2.2 Å

PDB Description: alanine racemase with bound inhibitor derived from d-cycloserine

SCOP Domain Sequences for d1epvb2:

Sequence; same for both SEQRES and ATOM records:

>d1epvb2 c.1.6.1 (B:12-244) Alanine racemase {Bacillus stearothermophilus}
vdldaiydnvenlrrllpddthimavvkanayghgdvqvartaleagasrlavafldeal
alrekgieapilvlgasrpadaalaaqqrialtvfrsdwleeasalysgpfpihfhlkmd
tgmgrlgvkdeeetkrivalierhphfvleglythfatadevntdyfsyqytrflhmlew
lpsrpplvhcansaaslrfpdrtfnmvrfgiamyglapspgikpllpyplkea

Timeline for d1epvb2:

• d1epvb2 is new in SCOP 1.63
  
• d1epvb2 appears in SCOP 1.65
  
• d1epvb2 appears in the current release, SCOPe 2.08