Lineage for d8icxa4 (8icx A:149-335)

  1. Root: SCOP 1.65
  2. 323018Class d: Alpha and beta proteins (a+b) [53931] (234 folds)
  3. 338199Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
    core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
  4. 338200Superfamily d.218.1: Nucleotidyltransferase [81301] (4 families) (S)
  5. 338208Family d.218.1.2: DNA polymerase beta-like [81300] (3 proteins)
    insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain
  6. 338209Protein DNA polymerase beta, catalytic (31 kD) fragment [81578] (2 species)
  7. 338210Species Human (Homo sapiens) [TaxId:9606] [81574] (92 PDB entries)
  8. 338257Domain d8icxa4: 8icx A:149-335 [76081]
    Other proteins in same PDB: d8icxa1, d8icxa3
    protein/DNA complex; complexed with mn, na, ttp

Details for d8icxa4

PDB Entry: 8icx (more details), 3 Å

PDB Description: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with seven base pairs of dna; soaked in the presence of dttp (1 millimolar) and mncl2 (5 millimolar)

SCOP Domain Sequences for d8icxa4:

Sequence; same for both SEQRES and ATOM records: (download)

>d8icxa4 d.218.1.2 (A:149-335) DNA polymerase beta, catalytic (31 kD) fragment {Human (Homo sapiens)}
ripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqp
kllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycg
vlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyr
epkdrse

SCOP Domain Coordinates for d8icxa4:

Click to download the PDB-style file with coordinates for d8icxa4.
(The format of our PDB-style files is described here.)

Timeline for d8icxa4: